RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 DACT2Q5SW24 774 aa9.53□□□□□ -0.88
GINS3-207ENST00000567400 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
GINS3-207ENST00000567400 USP17L1Q7RTZ2 530 aa9.53□□□□□ -0.88
GINS3-207ENST00000567400 ANKRD44Q8N8A2 993 aa9.53□□□□□ -0.88
GINS3-207ENST00000567400 AGBL3Q8NEM8 1001 aa9.53□□□□□ -0.88
GINS3-207ENST00000567400 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
GINS3-207ENST00000567400 C9orf78Q9NZ63 289 aaPredicted RBP9.53□□□□□ -0.88
GINS3-207ENST00000567400 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
GINS3-207ENST00000567400 LEMD3Q9Y2U8 911 aa9.53□□□□□ -0.88
GINS3-207ENST00000567400 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
GINS3-207ENST00000567400 ADM5C9JUS6 153 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 G3V3G9 751 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 CELF2O95319 508 aaKnown RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 DEFB115Q30KQ5 88 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 RABL6Q3YEC7 729 aaPredicted RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 C15orf52Q6ZUT6 534 aaKnown RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 SAPCD2Q86UD0 394 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 USP48Q86UV5 1035 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 MIER1Q8N108 512 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 PUS3Q9BZE2 481 aaKnown RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 ANKRD2Q9GZV1 360 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 COA1Q9GZY4 146 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 USP44Q9H0E7 712 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 BICC1Q9H694 974 aaKnown RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 GGA3Q9NZ52 723 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
GINS3-207ENST00000567400 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
GINS3-207ENST00000567400 USP17L8P0C7I0 530 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 CCDC57Q2TAC2 916 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 CDC37L1Q7L3B6 337 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 KRT26Q7Z3Y9 468 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 MYOZ2Q9NPC6 264 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 SMC4Q9NTJ3 1288 aa9.51□□□□□ -0.89
GINS3-207ENST00000567400 FOXN1O15353 648 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 CT47B1P0C2W7 299 aaPredicted RBP9.5□□□□□ -0.89
GINS3-207ENST00000567400 RARSP54136 660 aaKnown RBP9.5□□□□□ -0.89
GINS3-207ENST00000567400 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
GINS3-207ENST00000567400 IFFO2Q5TF58 517 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 STRIP1Q5VSL9 837 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 LDHAL6AQ6ZMR3 332 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 CERS5Q8N5B7 392 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 CAPNS2Q96L46 248 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 ZNF408Q9H9D4 720 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 CD209Q9NNX6 404 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 WBP1LQ9NX94 342 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
GINS3-207ENST00000567400 RIPOR2Q9Y4F9 1068 aa9.5□□□□□ -0.89
GINS3-207ENST00000567400 ARAP2Q8WZ64 1704 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 IL1R1P14778 569 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 KCNJ4P48050 445 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 GTF2IP78347 998 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 SCARF1Q14162 830 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 NBPF9Q3BBW0 867 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 LRRC24Q50LG9 513 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 ANGEL2Q5VTE6 544 aaKnown RBP9.49□□□□□ -0.89
GINS3-207ENST00000567400 TTLL5Q6EMB2 1281 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 VGLL2Q8N8G2 317 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 KLHDC4Q8TBB5 520 aa9.49□□□□□ -0.89
GINS3-207ENST00000567400 NOB1Q9ULX3 412 aaKnown RBP9.49□□□□□ -0.89
GINS3-207ENST00000567400 WNT10BO00744 389 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 PLIN1O60240 522 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 AOC2O75106 756 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
GINS3-207ENST00000567400 TAF7LQ5H9L4 462 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 DIEXFQ68CQ4 756 aaKnown RBP9.48□□□□□ -0.89
GINS3-207ENST00000567400 KIAA0825Q8IV33 1275 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 DCPSQ96C86 337 aaKnown RBP9.48□□□□□ -0.89
GINS3-207ENST00000567400 ZBED3Q96IU2 234 aaPredicted RBP9.48□□□□□ -0.89
GINS3-207ENST00000567400 HHIPL1Q96JK4 782 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 CNNM1Q9NRU3 951 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 MYO3BQ8WXR4 1341 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 PITPNM2Q9BZ72 1349 aa9.48□□□□□ -0.89
GINS3-207ENST00000567400 SASH1O94885 1247 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 GYG1P46976 350 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 GRM1Q13255 1194 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
GINS3-207ENST00000567400 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 CDCA5Q96FF9 252 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 GBA2Q9HCG7 927 aaPredicted RBP9.47□□□□□ -0.89
GINS3-207ENST00000567400 JAG2Q9Y219 1238 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 PCDHAC2Q9Y5I4 1007 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 AOX1Q06278 1338 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
GINS3-207ENST00000567400 FAM155AB1AL88 458 aaPredicted RBP9.46□□□□□ -0.9
GINS3-207ENST00000567400 ECE1P42892 770 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 HUNKP57058 714 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 UBE4AQ14139 1066 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 PRAMEF18Q5VWM3 479 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 ZNF804AQ7Z570 1209 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 TDRD7Q8NHU6 1098 aaKnown RBP9.46□□□□□ -0.9
GINS3-207ENST00000567400 FAM84BQ96KN1 310 aaPredicted RBP9.46□□□□□ -0.9
GINS3-207ENST00000567400 TNNQ9UQP3 1299 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 ECM29Q5VYK3 1845 aa9.46□□□□□ -0.9
GINS3-207ENST00000567400 MROH5Q6ZUA9 1318 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms