RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 NOP2P46087 812 aaKnown RBP29.02■■■□□ 2.24
FANCA-221ENST00000566889 NLRP12P59046 1061 aa29.02■■■□□ 2.24
FANCA-221ENST00000566889 NSUN7Q8NE18 718 aaKnown RBP29.02■■■□□ 2.24
FANCA-221ENST00000566889 GOLGA6L9A6NEM1 432 aa29.01■■■□□ 2.24
FANCA-221ENST00000566889 IKBKBO14920 756 aa29.01■■■□□ 2.24
FANCA-221ENST00000566889 RICTORQ6R327 1708 aa29.01■■■□□ 2.23
FANCA-221ENST00000566889 CBFA2T2O43439 604 aa29.01■■■□□ 2.23
FANCA-221ENST00000566889 RABGGTAQ92696 567 aa29.01■■■□□ 2.23
FANCA-221ENST00000566889 ATG3Q9NT62 314 aa29.01■■■□□ 2.23
FANCA-221ENST00000566889 ZNF589Q86UQ0 364 aaPredicted RBP29■■■□□ 2.23
FANCA-221ENST00000566889 C10orf67Q8IYJ2 551 aa29■■■□□ 2.23
FANCA-221ENST00000566889 MAP3K9P80192 1104 aa29■■■□□ 2.23
FANCA-221ENST00000566889 FANCCQ00597 558 aa29■■■□□ 2.23
FANCA-221ENST00000566889 RSRC2Q7L4I2 434 aaKnown RBP29■■■□□ 2.23
FANCA-221ENST00000566889 GOLGA6L1Q8N7Z2 621 aa29■■■□□ 2.23
FANCA-221ENST00000566889 FBXW7Q969H0 707 aa29■■■□□ 2.23
FANCA-221ENST00000566889 FUT8Q9BYC5 575 aa29■■■□□ 2.23
FANCA-221ENST00000566889 ADAM21Q9UKJ8 722 aa29■■■□□ 2.23
FANCA-221ENST00000566889 PCDHA7Q9UN72 937 aa29■■■□□ 2.23
FANCA-221ENST00000566889 U3KPZ7 1027 aaPredicted RBP29■■■□□ 2.23
FANCA-221ENST00000566889 ACTN2P35609 894 aa28.99■■■□□ 2.23
FANCA-221ENST00000566889 NCAPHQ15003 741 aa28.99■■■□□ 2.23
FANCA-221ENST00000566889 EAF2Q96CJ1 260 aaPredicted RBP28.99■■■□□ 2.23
FANCA-221ENST00000566889 RTEL1Q9NZ71 1219 aa28.99■■■□□ 2.23
FANCA-221ENST00000566889 PA2G4Q9UQ80 394 aaKnown RBP28.99■■■□□ 2.23
FANCA-221ENST00000566889 IVLP07476 585 aa28.98■■■□□ 2.23
FANCA-221ENST00000566889 ERCC4Q92889 916 aaPredicted RBP28.98■■■□□ 2.23
FANCA-221ENST00000566889 CHMP4CQ96CF2 233 aa28.98■■■□□ 2.23
FANCA-221ENST00000566889 DHX16O60231 1041 aaKnown RBP28.98■■■□□ 2.23
FANCA-221ENST00000566889 HMGB1P09429 215 aaKnown RBP28.98■■■□□ 2.23
FANCA-221ENST00000566889 NOM1Q5C9Z4 860 aaKnown RBP28.98■■■□□ 2.23
FANCA-221ENST00000566889 AMPHP49418 695 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 G3BP1Q13283 466 aaKnown RBP eCLIP28.97■■■□□ 2.23
FANCA-221ENST00000566889 C9orf78Q9NZ63 289 aaPredicted RBP28.97■■■□□ 2.23
FANCA-221ENST00000566889 RRP15Q9Y3B9 282 aaKnown RBP28.97■■■□□ 2.23
FANCA-221ENST00000566889 PTPDC1A2A3K4 754 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 FANCGO15287 622 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 SOX12O15370 315 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 EIF2S2P20042 333 aaKnown RBP28.97■■■□□ 2.23
FANCA-221ENST00000566889 CCDC34Q96HJ3 373 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 BOLA2Q9H3K6 86 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 CHPF2Q9P2E5 772 aa28.97■■■□□ 2.23
FANCA-221ENST00000566889 SASH1O94885 1247 aa28.96■■■□□ 2.23
FANCA-221ENST00000566889 LCMT1Q9UIC8 334 aa28.96■■■□□ 2.23
FANCA-221ENST00000566889 CCDC151A5D8V7 595 aa28.96■■■□□ 2.23
FANCA-221ENST00000566889 ARHGAP6O43182 974 aa28.96■■■□□ 2.23
FANCA-221ENST00000566889 SLC3A2P08195 630 aaKnown RBP28.96■■■□□ 2.23
FANCA-221ENST00000566889 PPP2R3AQ06190 1150 aa28.96■■■□□ 2.23
FANCA-221ENST00000566889 MRFAP1Q9Y605 127 aa28.96■■■□□ 2.23
FANCA-221ENST00000566889 NCAPD2Q15021 1401 aa28.95■■■□□ 2.23
FANCA-221ENST00000566889 TRIM66O15016 1216 aa28.95■■■□□ 2.22
FANCA-221ENST00000566889 MYO1BO43795 1136 aa28.95■■■□□ 2.22
FANCA-221ENST00000566889 LMAN1P49257 510 aa28.95■■■□□ 2.22
FANCA-221ENST00000566889 NDUFA8P51970 172 aa28.95■■■□□ 2.22
FANCA-221ENST00000566889 BRD3Q15059 726 aa28.95■■■□□ 2.22
FANCA-221ENST00000566889 UTP14AQ9BVJ6 771 aaKnown RBP28.95■■■□□ 2.22
FANCA-221ENST00000566889 PARD6BQ9BYG5 372 aa28.95■■■□□ 2.22
FANCA-221ENST00000566889 A0A1B0GVL5 298 aa28.94■■■□□ 2.22
FANCA-221ENST00000566889 VWA3AA6NCI4 1184 aa28.94■■■□□ 2.22
FANCA-221ENST00000566889 LEKR1Q6ZMV7 388 aa28.94■■■□□ 2.22
FANCA-221ENST00000566889 MSL3Q8N5Y2 521 aaKnown RBP28.94■■■□□ 2.22
FANCA-221ENST00000566889 KCNG4Q8TDN1 519 aa28.94■■■□□ 2.22
FANCA-221ENST00000566889 GOLGA1Q92805 767 aa28.94■■■□□ 2.22
FANCA-221ENST00000566889 CCDC8Q9H0W5 538 aaPredicted RBP28.94■■■□□ 2.22
FANCA-221ENST00000566889 RFX7Q2KHR2 1363 aa28.94■■■□□ 2.22
FANCA-221ENST00000566889 CTDNEP1O95476 244 aa28.93■■■□□ 2.22
FANCA-221ENST00000566889 EIF4A1P60842 406 aaKnown RBP28.93■■■□□ 2.22
FANCA-221ENST00000566889 GNL2Q13823 731 aaKnown RBP28.93■■■□□ 2.22
FANCA-221ENST00000566889 PTPRUQ92729 1446 aa28.93■■■□□ 2.22
FANCA-221ENST00000566889 NEDD4P46934 1319 aa28.93■■■□□ 2.22
FANCA-221ENST00000566889 SALL1Q9NSC2 1324 aa28.93■■■□□ 2.22
FANCA-221ENST00000566889 MAP2K7O14733 419 aa28.93■■■□□ 2.22
FANCA-221ENST00000566889 ILDR1Q86SU0 546 aaPredicted RBP28.93■■■□□ 2.22
FANCA-221ENST00000566889 PPP2R2CQ9Y2T4 447 aa28.93■■■□□ 2.22
FANCA-221ENST00000566889 PLEKHG2Q9H7P9 1386 aa28.92■■■□□ 2.22
FANCA-221ENST00000566889 RPS6KA5O75582 802 aa28.92■■■□□ 2.22
FANCA-221ENST00000566889 TXLNAP40222 546 aa28.92■■■□□ 2.22
FANCA-221ENST00000566889 UBASH3AP57075 661 aa28.92■■■□□ 2.22
FANCA-221ENST00000566889 LONRF2Q1L5Z9 754 aa28.92■■■□□ 2.22
FANCA-221ENST00000566889 FMNL2Q96PY5 1086 aa28.92■■■□□ 2.22
FANCA-221ENST00000566889 YEATS4O95619 227 aa28.91■■■□□ 2.22
FANCA-221ENST00000566889 LMOD1P29536 600 aaPredicted RBP28.91■■■□□ 2.22
FANCA-221ENST00000566889 LINC00301Q8NCQ3 95 aa28.91■■■□□ 2.22
FANCA-221ENST00000566889 SF3A1Q15459 793 aaKnown RBP28.9■■■□□ 2.22
FANCA-221ENST00000566889 DHX32Q7L7V1 743 aaKnown RBP28.9■■■□□ 2.22
FANCA-221ENST00000566889 VSTM4Q8IW00 320 aa28.9■■■□□ 2.22
FANCA-221ENST00000566889 HNRNPLLQ8WVV9 542 aaKnown RBP28.9■■■□□ 2.22
FANCA-221ENST00000566889 EPC1Q9H2F5 836 aa28.9■■■□□ 2.22
FANCA-221ENST00000566889 ICE2Q659A1 982 aa28.9■■■□□ 2.22
FANCA-221ENST00000566889 A0A1B0GUL7 405 aa28.89■■■□□ 2.22
FANCA-221ENST00000566889 CYP21A2P08686 494 aa28.89■■■□□ 2.22
FANCA-221ENST00000566889 FOSBP53539 338 aa28.89■■■□□ 2.22
FANCA-221ENST00000566889 STK38Q15208 465 aa28.89■■■□□ 2.22
FANCA-221ENST00000566889 BRMS1Q9HCU9 246 aa28.89■■■□□ 2.22
FANCA-221ENST00000566889 GEMIN8Q9NWZ8 242 aaKnown RBP28.89■■■□□ 2.22
FANCA-221ENST00000566889 TLR7Q9NYK1 1049 aaKnown RBP28.89■■■□□ 2.22
FANCA-221ENST00000566889 TOP1P11387 765 aaKnown RBP28.89■■■□□ 2.21
FANCA-221ENST00000566889 GNG11P61952 73 aa28.89■■■□□ 2.21
FANCA-221ENST00000566889 AGXT2Q9BYV1 514 aa28.89■■■□□ 2.21
FANCA-221ENST00000566889 CEMIPQ8WUJ3 1361 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms