RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 CHST3Q7LGC8 479 aa12.13□□□□□ -0.47
CCNDBP1-210ENST00000566882 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
CCNDBP1-210ENST00000566882 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 PHKA1P46020 1223 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 AKAP2Q9Y2D5 859 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 TAF1P21675 1872 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 RFX7Q2KHR2 1363 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
CCNDBP1-210ENST00000566882 STX6O43752 255 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 PSMA5P28066 241 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 Q6ZUG5 572 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 TMEM63CQ9P1W3 806 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 PDE8BO95263 885 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 HAND2P61296 217 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
CCNDBP1-210ENST00000566882 NTSR2O95665 410 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 ZSCAN22P10073 491 aaPredicted RBP12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 ZSCAN23Q3MJ62 389 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 UTP14AQ9BVJ6 771 aaKnown RBP12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 PIH1D3Q9NQM4 214 aaKnown RBP12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 HMG20BQ9P0W2 317 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 JAK2O60674 1132 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 CCDC24Q8N4L8 307 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 RREB1Q92766 1687 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 MRE11P49959 708 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 CCDC102BQ68D86 513 aa12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 ZSCAN31Q96LW9 406 aaPredicted RBP12.1□□□□□ -0.47
CCNDBP1-210ENST00000566882 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 VPS72Q15906 364 aa12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 BRF1Q92994 677 aa12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 SH2B1Q9NRF2 756 aaPredicted RBP12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 F13A1P00488 732 aa12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 PTMSP20962 102 aa12.09□□□□□ -0.47
CCNDBP1-210ENST00000566882 E7EWF7 191 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 DSCC1Q9BVC3 393 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 FGFR2P21802 821 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 APOBRQ0VD83 1088 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 USP21Q9UK80 565 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
CCNDBP1-210ENST00000566882 IDH1O75874 414 aaKnown RBP12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 SLC9C2Q5TAH2 1124 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 MYH7P12883 1935 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 SYCE3A1L190 88 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 FIBPO43427 364 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 FGAP02671 866 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 HSP90B1P14625 803 aaKnown RBP12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 FOSBP53539 338 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 LARP1BQ659C4 914 aaKnown RBP12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 SLC51AQ86UW1 340 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 NCOA5Q9HCD5 579 aaKnown RBP12.07□□□□□ -0.48
CCNDBP1-210ENST00000566882 LRP5O75197 1615 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 GPAA1O43292 621 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 BCAMP50895 628 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 SCRN1Q12765 414 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 KRT32Q14532 448 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 RAB11FIP4Q86YS3 637 aa12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 FNBP4Q8N3X1 1017 aaPredicted RBP12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
CCNDBP1-210ENST00000566882 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
CCNDBP1-210ENST00000566882 DHX32Q7L7V1 743 aaKnown RBP12.05□□□□□ -0.48
CCNDBP1-210ENST00000566882 APPBP2Q92624 585 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms