RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 ZNF445P59923 1031 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 NMIQ13287 307 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 NECTIN1Q15223 517 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 ZNF609O15014 1411 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 COL4A1P02462 1669 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 TTC39AQ5SRH9 613 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 HAUS7Q99871 368 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 TM6SF1Q9BZW5 370 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
PDXDC1-214ENST00000566633 A0A0D9SFI3 127 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 CHRNDQ07001 517 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 ZSCAN23Q3MJ62 389 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 CCDC158Q5M9N0 1113 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 MAP4K1Q92918 833 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 ADRA2BP18089 450 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 ADCK5Q3MIX3 580 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 CNBD1Q8NA66 436 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
PDXDC1-214ENST00000566633 SERPINB2P05120 415 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 CPA1P15085 419 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 PRR5LQ6MZQ0 368 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 ANKRD18AQ8IVF6 992 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 PAG1Q9NWQ8 432 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 ZAP70P43403 619 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 PHKA1P46020 1223 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 DDR1Q08345 913 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 DEFB132Q7Z7B7 95 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 WDR33Q9C0J8 1336 aaKnown RBP12.91□□□□□ -0.34
PDXDC1-214ENST00000566633 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 MROH5Q6ZUA9 1318 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 BCORQ6W2J9 1755 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 TM4SF1P30408 202 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 MCAMP43121 646 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 BCAMP50895 628 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 CCDC102BQ68D86 513 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
PDXDC1-214ENST00000566633 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 LPIN2Q92539 896 aa12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 FGFR2P21802 821 aa12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 KBTBD3Q8NAB2 608 aa12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-214ENST00000566633 UTRNP46939 3433 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 RGL2O15211 777 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 MBD3O95983 291 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 TAF1P21675 1872 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 SLC27A2O14975 620 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 LARGE1O95461 756 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 SCN7AQ01118 1682 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 MED23Q9ULK4 1368 aa12.88□□□□□ -0.35
PDXDC1-214ENST00000566633 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 KLRK1P26718 216 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 KCNJ4P48050 445 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 MYH3P11055 1940 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 C4AP0C0L4 1744 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 SLC5A1P13866 664 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 SYT1P21579 422 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 GYG1P46976 350 aa12.87□□□□□ -0.35
PDXDC1-214ENST00000566633 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms