RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 TEX11Q8IYF3 940 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 TDRD7Q8NHU6 1098 aaKnown RBP6.57□□□□□ -1.36
GDPD3-205ENST00000566613 GIMAP7Q8NHV1 300 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 ZNF428Q96B54 188 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 IL17RAQ96F46 866 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 DDX11Q96FC9 970 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 ETAA1Q9NY74 926 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 ORC3Q9UBD5 711 aaPredicted RBP6.57□□□□□ -1.36
GDPD3-205ENST00000566613 RABGEF1Q9UJ41 708 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 AXIN2Q9Y2T1 843 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 FAM135BQ49AJ0 1406 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 ADGRL3Q9HAR2 1447 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 TRAPPC8Q9Y2L5 1435 aa6.57□□□□□ -1.36
GDPD3-205ENST00000566613 ITSN1Q15811 1721 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 SMAPO00193 183 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 ELF1P32519 619 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 ZNF75DP51815 510 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 ADCY2Q08462 1091 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 NR1H3Q13133 447 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 SMC1AQ14683 1233 aaKnown RBP6.56□□□□□ -1.36
GDPD3-205ENST00000566613 CRYMQ14894 314 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
GDPD3-205ENST00000566613 PROX2Q3B8N5 592 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 CCDC30Q5VVM6 783 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 GBP6Q6ZN66 633 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 RETREG3Q86VR2 466 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 PLEKHM2Q8IWE5 1019 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 ZGPATQ8N5A5 531 aaKnown RBP6.56□□□□□ -1.36
GDPD3-205ENST00000566613 EPS8L1Q8TE68 723 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 HLA-CQ95604 372 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 MKL1Q969V6 931 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 MIEF2Q96C03 454 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 FAXDC2Q96IV6 333 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 ZBED2Q9BTP6 218 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 KIAA1468Q9P260 1216 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 CLIP2Q9UDT6 1046 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 DNAI1Q9UI46 699 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.56□□□□□ -1.36
GDPD3-205ENST00000566613 ATP6V1DQ9Y5K8 247 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 RAPGEF6Q8TEU7 1601 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 YTHDC2Q9H6S0 1430 aaKnown RBP6.56□□□□□ -1.36
GDPD3-205ENST00000566613 MAST1Q9Y2H9 1570 aa6.56□□□□□ -1.36
GDPD3-205ENST00000566613 TTC21BQ7Z4L5 1316 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ZC3H4Q9UPT8 1303 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 IFT140Q96RY7 1462 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 N4BP2Q86UW6 1770 aaPredicted RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 EFCAB8A8MWE9 144 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ARHGAP33O14559 1287 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 U2SURPO15042 1029 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 PPFIA4O75335 1185 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 TADA3O75528 432 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 TBC1D8O95759 1140 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 GCFC2P16383 781 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 CASTP20810 708 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 MRPL12P52815 198 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 GSDMDP57764 484 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ANAPC15P60006 121 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 DDR1Q08345 913 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 FUT2Q10981 343 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 SF3B2Q13435 895 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 NR6A1Q15406 480 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ARHGAP29Q52LW3 1261 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ANKRD23Q86SG2 305 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 MICALL1Q8N3F8 863 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 SPC24Q8NBT2 197 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 MRFAP1L1Q96HT8 127 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 SH3GL3Q99963 347 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ZBTB40Q9NUA8 1239 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 KDRP35968 1356 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 KIF24Q5T7B8 1368 aa6.55□□□□□ -1.36
GDPD3-205ENST00000566613 ZNF518AQ6AHZ1 1483 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 FANCD2Q9BXW9 1451 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 PPIP5K1Q6PFW1 1433 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 RBM47A0AV96 593 aaKnown RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 POLR3GO15318 223 aaPredicted RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 AP5Z1O43299 807 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 EPB41L2O43491 1005 aaKnown RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 ARID4AP29374 1257 aaPredicted RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 RWDD2BP57060 319 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 TRAF1Q13077 416 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 FAM98CQ17RN3 349 aaKnown RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 Q3C1V9 767 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 CC2D2BQ6DHV5 1058 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 CC2D1AQ6P1N0 951 aaPredicted RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 ATF7IPQ6VMQ6 1270 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 TXNDC2Q86VQ3 553 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 CCAR2Q8N163 923 aaKnown RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 UBXN4Q92575 508 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 KCNK17Q96T54 332 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 TRIM6Q9C030 488 aaPredicted RBP6.54□□□□□ -1.36
GDPD3-205ENST00000566613 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 MCM8Q9UJA3 840 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 ADAM21Q9UKJ8 722 aa6.54□□□□□ -1.36
GDPD3-205ENST00000566613 EXOC6BQ9Y2D4 811 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms