RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 A0A1B0GUL6 1792 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 AKAP11Q9UKA4 1901 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 TNS1Q9HBL0 1735 aaKnown RBP10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 IGSF3O75054 1194 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 TRIM37O94972 964 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 SLC5A1P13866 664 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 DDIT3P35638 169 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 TTF1Q15361 905 aaPredicted RBP10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 TXNRD1Q16881 649 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 TSGA10IPQ3SY00 556 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 TTC39AQ5SRH9 613 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 AMIGO3Q86WK7 504 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 NBPF5PQ86XG9 351 aaPredicted RBP10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 ANKRD18AQ8IVF6 992 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 HMG20BQ9P0W2 317 aa10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 SRP68Q9UHB9 627 aaKnown RBP10.68□□□□□ -0.7
LSM3P5-201ENST00000566307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 NECTIN1Q15223 517 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 MCMDC2Q4G0Z9 681 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 GORABQ5T7V8 394 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 ANP32EQ9BTT0 268 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 SEC31BQ9NQW1 1179 aa10.67□□□□□ -0.7
LSM3P5-201ENST00000566307 A0A0D9SFI3 127 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 RNF113AO15541 343 aaKnown RBP10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 TAF5LO75529 589 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 GYS1P13807 737 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 TM4SF1P30408 202 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 ADORA1P30542 326 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 GSE1Q14687 1217 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 NFIXQ14938 502 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 DNAJC2Q99543 621 aaKnown RBP10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 MYH7P12883 1935 aa10.66□□□□□ -0.7
LSM3P5-201ENST00000566307 ZNF804BA4D1E1 1349 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 PDS5AQ29RF7 1337 aaKnown RBP10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 KLRG2A4D1S0 409 aaPredicted RBP10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 GOLIM4O00461 696 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 CHRNDQ07001 517 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 RNF20Q5VTR2 975 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 CCDC102BQ68D86 513 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 ZSCAN25Q6NSZ9 544 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 TMED8Q6PL24 325 aaPredicted RBP10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 ANKRD2Q9GZV1 360 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 PALD1Q9ULE6 856 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
LSM3P5-201ENST00000566307 DOCK2Q92608 1830 aa10.65□□□□□ -0.71
LSM3P5-201ENST00000566307 QSER1Q2KHR3 1735 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 MCAMP43121 646 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 RPS8P62241 208 aaKnown RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 PTH1RQ03431 593 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 KRT32Q14532 448 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 UBE3CQ15386 1083 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 CRY2Q49AN0 593 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 C3orf67Q6ZVT6 689 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 CNBD1Q8NA66 436 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 CHMP5Q9NZZ3 219 aa10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 RGS17Q9UGC6 210 aaPredicted RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 RBM8AQ9Y5S9 174 aaKnown RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
LSM3P5-201ENST00000566307 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 SEMA3EO15041 775 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 PSMA5P28066 241 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 ZAP70P43403 619 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 NEK4P51957 841 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 CUL4AQ13619 759 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 APPBP2Q92624 585 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 RNF25Q96BH1 459 aaPredicted RBP10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 INTS4Q96HW7 963 aaKnown RBP10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 TTC14Q96N46 770 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 CWC22Q9HCG8 908 aaKnown RBP10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 MINPP1Q9UNW1 487 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 COL4A1P02462 1669 aa10.63□□□□□ -0.71
LSM3P5-201ENST00000566307 SLC27A2O14975 620 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 PHF14O94880 888 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 APBA3O96018 575 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 SERPINB2P05120 415 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 HOXA10P31260 410 aaPredicted RBP10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 PHKA1P46020 1223 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 ST5P78524 1137 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms