RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 MRFAP1L1Q96HT8 127 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 CACTINQ8WUQ7 758 aaKnown RBP12.86□□□□□ -0.35
TCF4-232ENST00000566286 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
TCF4-232ENST00000566286 PGBD1Q96JS3 809 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 CTNNA3Q9UI47 895 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 MST1RQ04912 1400 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
TCF4-232ENST00000566286 UTYO14607 1347 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 SASH1O94885 1247 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 RBM6P78332 1123 aaKnown RBP12.85□□□□□ -0.35
TCF4-232ENST00000566286 GABPB1Q06547 395 aaPredicted RBP12.85□□□□□ -0.35
TCF4-232ENST00000566286 RESTQ13127 1097 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 CEP135Q66GS9 1140 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 USHBP1Q8N6Y0 703 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 ALS2Q96Q42 1657 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 DCCP43146 1447 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 H3BQV1 296 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 GRM8O00222 908 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 ANXA1P04083 346 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 PDIA6Q15084 440 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 STX1AQ16623 288 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 LGR6Q9HBX8 967 aa12.85□□□□□ -0.35
TCF4-232ENST00000566286 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 HSPA2P54652 639 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 IQCB1Q15051 598 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 TAF3Q5VWG9 929 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 TCEANC2Q96MN5 208 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
TCF4-232ENST00000566286 MRC1P22897 1456 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
TCF4-232ENST00000566286 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.35
TCF4-232ENST00000566286 STK3Q13188 491 aa12.83□□□□□ -0.35
TCF4-232ENST00000566286 CCDC144BQ3MJ40 725 aa12.83□□□□□ -0.35
TCF4-232ENST00000566286 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.35
TCF4-232ENST00000566286 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.35
TCF4-232ENST00000566286 BRF1Q92994 677 aa12.83□□□□□ -0.35
TCF4-232ENST00000566286 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.35
TCF4-232ENST00000566286 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.35
TCF4-232ENST00000566286 KCNQ3O43525 872 aa12.83□□□□□ -0.36
TCF4-232ENST00000566286 TAF5LO75529 589 aa12.83□□□□□ -0.36
TCF4-232ENST00000566286 GCP02774 474 aa12.83□□□□□ -0.36
TCF4-232ENST00000566286 ATL3Q6DD88 541 aa12.83□□□□□ -0.36
TCF4-232ENST00000566286 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
TCF4-232ENST00000566286 NEK1Q96PY6 1258 aa12.83□□□□□ -0.36
TCF4-232ENST00000566286 LLPHQ9BRT6 129 aaKnown RBP12.83□□□□□ -0.36
TCF4-232ENST00000566286 BECN2A8MW95 431 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 KIF2AO00139 706 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 CWF19L2Q2TBE0 894 aaKnown RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 ARHGEF25Q86VW2 580 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 MORC2Q9Y6X9 1032 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 XIRP1Q702N8 1843 aaKnown RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 ATF3P18847 181 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 NAA16Q6N069 864 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 NYAP1Q6ZVC0 841 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 ZNF397Q8NF99 534 aaPredicted RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
TCF4-232ENST00000566286 KCND1Q9NSA2 647 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 ANO10Q9NW15 660 aa12.82□□□□□ -0.36
TCF4-232ENST00000566286 HEG1Q9ULI3 1381 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 JAK2O60674 1132 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 CCDC73Q6ZRK6 1079 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 TLR7Q9NYK1 1049 aaKnown RBP12.81□□□□□ -0.36
TCF4-232ENST00000566286 RCOR1Q9UKL0 485 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 TAF6LQ9Y6J9 622 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 CAMTA1Q9Y6Y1 1673 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
TCF4-232ENST00000566286 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
TCF4-232ENST00000566286 SKILP12757 684 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 GSDMDP57764 484 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 KIF18AQ8NI77 898 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 ZNF592Q92610 1267 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 KINO60870 393 aaKnown RBP12.8□□□□□ -0.36
TCF4-232ENST00000566286 Q6ZUG5 572 aa12.8□□□□□ -0.36
TCF4-232ENST00000566286 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
TCF4-232ENST00000566286 ZNF771Q7L3S4 317 aaPredicted RBP12.8□□□□□ -0.36
TCF4-232ENST00000566286 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
TCF4-232ENST00000566286 ERO1AQ96HE7 468 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms