RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 PBX4Q9BYU1 374 aa10.25□□□□□ -0.77
KARS-205ENST00000565738 ABCB6Q9NP58 842 aa10.25□□□□□ -0.77
KARS-205ENST00000565738 NAGPAQ9UK23 515 aa10.25□□□□□ -0.77
KARS-205ENST00000565738 TTF2Q9UNY4 1162 aaKnown RBP10.25□□□□□ -0.77
KARS-205ENST00000565738 AKAP2Q9Y2D5 859 aa10.25□□□□□ -0.77
KARS-205ENST00000565738 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
KARS-205ENST00000565738 PDE2AO00408 941 aaPredicted RBP10.24□□□□□ -0.77
KARS-205ENST00000565738 ZNF76P36508 570 aa10.24□□□□□ -0.77
KARS-205ENST00000565738 NFX1Q12986 1120 aaKnown RBP10.24□□□□□ -0.77
KARS-205ENST00000565738 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
KARS-205ENST00000565738 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
KARS-205ENST00000565738 PLD4Q96BZ4 506 aa10.24□□□□□ -0.77
KARS-205ENST00000565738 SMG9Q9H0W8 520 aaKnown RBP10.24□□□□□ -0.77
KARS-205ENST00000565738 ADARB2-AS1A8MUL3 147 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 NFKBIEO00221 500 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 SMNDC1O75940 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
KARS-205ENST00000565738 GRIA4P48058 902 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 FANCCQ00597 558 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 SPRED3Q2MJR0 410 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 PERM1Q5SV97 790 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 GOLGA6L1Q8N7Z2 621 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 TMEM102Q8N9M5 508 aaPredicted RBP10.23□□□□□ -0.77
KARS-205ENST00000565738 RNF34Q969K3 372 aa10.23□□□□□ -0.77
KARS-205ENST00000565738 ELOA3CA0A087WX78 387 aaPredicted RBP10.22□□□□□ -0.77
KARS-205ENST00000565738 ELOA3DA6NLF2 546 aaPredicted RBP10.22□□□□□ -0.77
KARS-205ENST00000565738 KRT76Q01546 638 aa10.22□□□□□ -0.77
KARS-205ENST00000565738 TAF1CQ15572 869 aaPredicted RBP10.22□□□□□ -0.77
KARS-205ENST00000565738 ELOA3BQ3SY89 546 aa10.22□□□□□ -0.77
KARS-205ENST00000565738 C3orf58Q8NDZ4 430 aa10.22□□□□□ -0.77
KARS-205ENST00000565738 ELOA3Q8NG57 546 aa10.22□□□□□ -0.77
KARS-205ENST00000565738 NXPE3Q969Y0 559 aa10.22□□□□□ -0.77
KARS-205ENST00000565738 FBXO24O75426 580 aa10.21□□□□□ -0.77
KARS-205ENST00000565738 ADAMTS2O95450 1211 aa10.21□□□□□ -0.77
KARS-205ENST00000565738 ALAS2P22557 587 aa10.21□□□□□ -0.77
KARS-205ENST00000565738 ERCC5P28715 1186 aaPredicted RBP10.21□□□□□ -0.77
KARS-205ENST00000565738 SRSF11Q05519 484 aaKnown RBP10.21□□□□□ -0.77
KARS-205ENST00000565738 PSAPL1Q6NUJ1 521 aa10.21□□□□□ -0.77
KARS-205ENST00000565738 NUDT8Q8WV74 236 aa10.21□□□□□ -0.77
KARS-205ENST00000565738 POP1Q99575 1024 aaKnown RBP10.21□□□□□ -0.77
KARS-205ENST00000565738 BHLHE41Q9C0J9 482 aaPredicted RBP10.21□□□□□ -0.77
KARS-205ENST00000565738 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
KARS-205ENST00000565738 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.77
KARS-205ENST00000565738 GDF2Q9UK05 429 aaPredicted RBP10.21□□□□□ -0.77
KARS-205ENST00000565738 SLCO4C1Q6ZQN7 724 aa10.2□□□□□ -0.78
KARS-205ENST00000565738 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
KARS-205ENST00000565738 LPIN3Q9BQK8 851 aa10.2□□□□□ -0.78
KARS-205ENST00000565738 TRIM33Q9UPN9 1127 aa10.2□□□□□ -0.78
KARS-205ENST00000565738 A0A096LPE4 126 aa10.19□□□□□ -0.78
KARS-205ENST00000565738 A0A1W2PPZ6 126 aa10.19□□□□□ -0.78
KARS-205ENST00000565738 XRCC5P13010 732 aaKnown RBP10.19□□□□□ -0.78
KARS-205ENST00000565738 GDF6Q6KF10 455 aaPredicted RBP10.19□□□□□ -0.78
KARS-205ENST00000565738 NT5DC4Q86YG4 428 aa10.19□□□□□ -0.78
KARS-205ENST00000565738 ACDQ96AP0 544 aa10.19□□□□□ -0.78
KARS-205ENST00000565738 RGS9O75916 674 aaPredicted RBP10.18□□□□□ -0.78
KARS-205ENST00000565738 TPTE2Q6XPS3 522 aa10.18□□□□□ -0.78
KARS-205ENST00000565738 METTL16Q86W50 562 aaKnown RBP10.18□□□□□ -0.78
KARS-205ENST00000565738 MDFIQ99750 246 aa10.18□□□□□ -0.78
KARS-205ENST00000565738 FAM177BA6PVY3 158 aa10.17□□□□□ -0.78
KARS-205ENST00000565738 EPXP11678 715 aa10.17□□□□□ -0.78
KARS-205ENST00000565738 PTPRAP18433 802 aa10.17□□□□□ -0.78
KARS-205ENST00000565738 ST13P50502 369 aaKnown RBP10.17□□□□□ -0.78
KARS-205ENST00000565738 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
KARS-205ENST00000565738 HS2ST1Q7LGA3 356 aa10.17□□□□□ -0.78
KARS-205ENST00000565738 MUC3BQ9H195 1237 aa10.17□□□□□ -0.78
KARS-205ENST00000565738 JPH1Q9HDC5 661 aaPredicted RBP10.17□□□□□ -0.78
KARS-205ENST00000565738 GGT7Q9UJ14 662 aa10.17□□□□□ -0.78
KARS-205ENST00000565738 ITPKAP23677 461 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 ADAMTSL4Q6UY14 1074 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 C1orf229Q6ZS94 237 aaPredicted RBP10.16□□□□□ -0.78
KARS-205ENST00000565738 GALNT6Q8NCL4 622 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 BSNDQ8WZ55 320 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 ZNF576Q9H609 170 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 FRRS1LQ9P0K9 344 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 GPN3Q9UHW5 284 aaPredicted RBP10.16□□□□□ -0.78
KARS-205ENST00000565738 PPM1HQ9ULR3 514 aa10.16□□□□□ -0.78
KARS-205ENST00000565738 GMPRP36959 345 aa10.15□□□□□ -0.78
KARS-205ENST00000565738 STARD13Q9Y3M8 1113 aa10.15□□□□□ -0.78
KARS-205ENST00000565738 F6X3S4 739 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 ALBP02768 609 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 CDC25BP30305 580 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
KARS-205ENST00000565738 MAP3K11Q16584 847 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 ZNF394Q53GI3 561 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 EDARADDQ8WWZ3 215 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 ZFYVE1Q9HBF4 777 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 SH2B1Q9NRF2 756 aaPredicted RBP10.14□□□□□ -0.79
KARS-205ENST00000565738 PCDHGB7Q9Y5F8 929 aa10.14□□□□□ -0.79
KARS-205ENST00000565738 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
KARS-205ENST00000565738 USP48Q86UV5 1035 aa10.13□□□□□ -0.79
KARS-205ENST00000565738 TRIM56Q9BRZ2 755 aaKnown RBP10.13□□□□□ -0.79
KARS-205ENST00000565738 CLEC4MQ9H2X3 399 aaPredicted RBP10.13□□□□□ -0.79
KARS-205ENST00000565738 CCSER2Q9H7U1 834 aa10.13□□□□□ -0.79
KARS-205ENST00000565738 WFS1O76024 890 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 CELA3AP09093 270 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 AMPD1P23109 780 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 CDC27P30260 824 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 PCDH1Q08174 1060 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 RAD51AP2Q09MP3 1159 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 FAAP100Q0VG06 881 aa10.12□□□□□ -0.79
KARS-205ENST00000565738 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms