RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CELF1Q92879 486 aaKnown RBP11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 XAGE2Q96GT9 111 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 ANKRD2Q9GZV1 360 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 IFIT1P09914 478 aaKnown RBP11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 FGFR2P21802 821 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 PANK2Q9BZ23 570 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 ARAP2Q8WZ64 1704 aa11.36□□□□□ -0.59
CNEP1R1-206ENST00000565556 BBOX1O75936 387 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 TTC39AQ5SRH9 613 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 TMC4Q7Z404 712 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 TICAM2Q86XR7 235 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 HAUS7Q99871 368 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 BOLA2Q9H3K6 86 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 A0A1B0GUL6 1792 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 HIP1O00291 1037 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
CNEP1R1-206ENST00000565556 TAF5LO75529 589 aa11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 MAP4K4O95819 1239 aaPredicted RBP11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 UQCRFS1P1P0C7P4 283 aa11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 NPR1P16066 1061 aa11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 CHMLP26374 656 aa11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 ADORA1P30542 326 aa11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 COL4A1P02462 1669 aa11.34□□□□□ -0.59
CNEP1R1-206ENST00000565556 SRGNP10124 158 aa11.33□□□□□ -0.6
CNEP1R1-206ENST00000565556 ALDH1B1P30837 517 aa11.33□□□□□ -0.6
CNEP1R1-206ENST00000565556 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
CNEP1R1-206ENST00000565556 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
CNEP1R1-206ENST00000565556 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 REC8O95072 547 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 HSP90AA1P07900 732 aaKnown RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 KCNJ4P48050 445 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 MASTLQ96GX5 879 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 H0YIN7 160 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 ARID4AP29374 1257 aaPredicted RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 LRRFIP1Q32MZ4 808 aaKnown RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 DIAPH3Q9NSV4 1193 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 GNL3LQ9NVN8 582 aaKnown RBP11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 LEMD3Q9Y2U8 911 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 RFX7Q2KHR2 1363 aa11.32□□□□□ -0.6
CNEP1R1-206ENST00000565556 GOLGA6L22H0YM25 854 aa11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 XDHP47989 1333 aa11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 PDGFDQ9GZP0 370 aaPredicted RBP11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
CNEP1R1-206ENST00000565556 ZNF804BA4D1E1 1349 aa11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 TTF1Q15361 905 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 SP8Q8IXZ3 490 aa11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 TRIM44Q96DX7 344 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 KIF2CQ99661 725 aa11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 TMX4Q9H1E5 349 aaPredicted RBP11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 AKAP11Q9UKA4 1901 aa11.3□□□□□ -0.6
CNEP1R1-206ENST00000565556 ESPNB1AK53 854 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 GOLIM4O00461 696 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 EPB41L2O43491 1005 aaKnown RBP11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 PHKA1P46020 1223 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 VPS37DQ86XT2 251 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 MTFR1LQ9H019 292 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 LRRC37AA6NMS7 1700 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 SNAP23O00161 211 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 SEMA3EO15041 775 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 POLD1P28340 1107 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 MCAMP43121 646 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 C15orf52Q6ZUT6 534 aaKnown RBP11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
CNEP1R1-206ENST00000565556 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 RAD50Q92878 1312 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 SGSM2O43147 1006 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 ZAP70P43403 619 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 BCAMP50895 628 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 SPATA5Q8NB90 893 aa11.28□□□□□ -0.6
CNEP1R1-206ENST00000565556 ZNF622Q969S3 477 aaKnown RBP eCLIP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms