RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CHADLQ6NUI6 762 aa23.29■■□□□ 1.32
CSPG4P13-201ENST00000565545 BSDC1Q9NW68 430 aaPredicted RBP23.29■■□□□ 1.32
CSPG4P13-201ENST00000565545 PDE8BO95263 885 aa23.28■■□□□ 1.32
CSPG4P13-201ENST00000565545 SDSP20132 328 aa23.28■■□□□ 1.32
CSPG4P13-201ENST00000565545 VGLL2Q8N8G2 317 aa23.28■■□□□ 1.32
CSPG4P13-201ENST00000565545 DBNLQ9UJU6 430 aaKnown RBP23.28■■□□□ 1.32
CSPG4P13-201ENST00000565545 A0A1B0GUL7 405 aa23.27■■□□□ 1.32
CSPG4P13-201ENST00000565545 KLRG2A4D1S0 409 aaPredicted RBP23.27■■□□□ 1.32
CSPG4P13-201ENST00000565545 CDC45O75419 566 aa23.27■■□□□ 1.32
CSPG4P13-201ENST00000565545 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
CSPG4P13-201ENST00000565545 CRY2Q49AN0 593 aa23.27■■□□□ 1.32
CSPG4P13-201ENST00000565545 TSHZ3Q63HK5 1081 aa23.26■■□□□ 1.31
CSPG4P13-201ENST00000565545 NEUROD6Q96NK8 337 aa23.26■■□□□ 1.31
CSPG4P13-201ENST00000565545 AK9Q5TCS8 1911 aa23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 TIAM2Q8IVF5 1701 aa23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 ATP5JP18859 108 aa23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 RPGRQ92834 1020 aaKnown RBP23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 DBNDD2Q9BQY9 259 aa23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 TLR7Q9NYK1 1049 aaKnown RBP23.25■■□□□ 1.31
CSPG4P13-201ENST00000565545 TIMM10P62072 90 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 PUM3Q15397 648 aaKnown RBP23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 CASC1Q6TDU7 716 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 CNTROBQ8N137 903 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 CREBZFQ9NS37 354 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 MKRN1Q9UHC7 482 aaKnown RBP23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 TAF1P21675 1872 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 CCDC88AQ3V6T2 1871 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
CSPG4P13-201ENST00000565545 IQCA1LA6NCM1 817 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 TRIM6-TRIM34B2RNG4 842 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 POTEIP0CG38 1075 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 POTEJP0CG39 1038 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 NPR1P16066 1061 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 HOXA10P31260 410 aaPredicted RBP23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 GRAPQ13588 217 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 CCDC93Q567U6 631 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 GRAPLQ8TC17 118 aaPredicted RBP23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 LPIN2Q92539 896 aa23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 CELF1Q92879 486 aaKnown RBP23.23■■□□□ 1.31
CSPG4P13-201ENST00000565545 ARAP2Q8WZ64 1704 aa23.22■■□□□ 1.31
CSPG4P13-201ENST00000565545 CHRNDQ07001 517 aa23.22■■□□□ 1.31
CSPG4P13-201ENST00000565545 CCDC158Q5M9N0 1113 aa23.22■■□□□ 1.31
CSPG4P13-201ENST00000565545 XAGE2Q96GT9 111 aa23.22■■□□□ 1.31
CSPG4P13-201ENST00000565545 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
CSPG4P13-201ENST00000565545 A0A1B0GUL6 1792 aa23.22■■□□□ 1.31
CSPG4P13-201ENST00000565545 SLC5A1P13866 664 aa23.21■■□□□ 1.31
CSPG4P13-201ENST00000565545 FGFR2P21802 821 aa23.21■■□□□ 1.31
CSPG4P13-201ENST00000565545 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
CSPG4P13-201ENST00000565545 GORABQ5T7V8 394 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 TBC1D9Q6ZT07 1266 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 TMC4Q7Z404 712 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 C7orf43Q8WVR3 580 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 RILPL2Q969X0 211 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 EVI5LQ96CN4 794 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 MINPP1Q9UNW1 487 aa23.2■■□□□ 1.3
CSPG4P13-201ENST00000565545 COL4A1P02462 1669 aa23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 BBOX1O75936 387 aa23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 UBE4AQ14139 1066 aa23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 LDHDQ86WU2 507 aa23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 TICAM2Q86XR7 235 aa23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 ZNF512BQ96KM6 892 aaPredicted RBP23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 ZNF277Q9NRM2 450 aaPredicted RBP23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 COL11A2P13942 1736 aaPredicted RBP23.19■■□□□ 1.3
CSPG4P13-201ENST00000565545 SLX4Q8IY92 1834 aa23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 FKBP4Q02790 459 aaKnown RBP eCLIP23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 EAPPQ56P03 285 aaPredicted RBP23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 RTKN2Q8IZC4 609 aa23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 HELBQ8NG08 1087 aaPredicted RBP23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 HAUS7Q99871 368 aa23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 BOLA2Q9H3K6 86 aa23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 TAF1DQ9H5J8 278 aaPredicted RBP23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 UPF2Q9HAU5 1272 aaKnown RBP23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 CLEC11AQ9Y240 323 aa23.18■■□□□ 1.3
CSPG4P13-201ENST00000565545 FER1L6Q2WGJ9 1857 aa23.17■■□□□ 1.3
CSPG4P13-201ENST00000565545 TTC39AQ5SRH9 613 aa23.17■■□□□ 1.3
CSPG4P13-201ENST00000565545 L3MBTL3Q96JM7 780 aaPredicted RBP23.17■■□□□ 1.3
CSPG4P13-201ENST00000565545 TAF5LO75529 589 aa23.16■■□□□ 1.3
CSPG4P13-201ENST00000565545 ADORA1P30542 326 aa23.16■■□□□ 1.3
CSPG4P13-201ENST00000565545 RBM19Q9Y4C8 960 aaKnown RBP23.16■■□□□ 1.3
CSPG4P13-201ENST00000565545 HIP1O00291 1037 aa23.15■■□□□ 1.3
CSPG4P13-201ENST00000565545 UQCRFS1P1P0C7P4 283 aa23.15■■□□□ 1.3
CSPG4P13-201ENST00000565545 ALDH1B1P30837 517 aa23.15■■□□□ 1.3
CSPG4P13-201ENST00000565545 OLFM4Q6UX06 510 aa23.15■■□□□ 1.3
CSPG4P13-201ENST00000565545 HACL1Q9UJ83 578 aa23.14■■□□□ 1.29
CSPG4P13-201ENST00000565545 RFX7Q2KHR2 1363 aa23.14■■□□□ 1.29
CSPG4P13-201ENST00000565545 ZNF541Q9H0D2 1346 aa23.13■■□□□ 1.29
CSPG4P13-201ENST00000565545 PCNTO95613 3336 aa23.13■■□□□ 1.29
CSPG4P13-201ENST00000565545 MAP4K4O95819 1239 aaPredicted RBP23.13■■□□□ 1.29
CSPG4P13-201ENST00000565545 CHMLP26374 656 aa23.13■■□□□ 1.29
CSPG4P13-201ENST00000565545 DICER1Q9UPY3 1922 aaKnown RBP23.13■■□□□ 1.29
CSPG4P13-201ENST00000565545 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
CSPG4P13-201ENST00000565545 SEC24BO95487 1268 aa23.12■■□□□ 1.29
CSPG4P13-201ENST00000565545 ARID4AP29374 1257 aaPredicted RBP23.12■■□□□ 1.29
CSPG4P13-201ENST00000565545 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
CSPG4P13-201ENST00000565545 LEMD3Q9Y2U8 911 aa23.12■■□□□ 1.29
CSPG4P13-201ENST00000565545 PASKQ96RG2 1323 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms