RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 POLR3AO14802 1390 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-214ENST00000565274 MYO3AQ8NEV4 1616 aa6.39□□□□□ -1.39
CAPN3-214ENST00000565274 MYCP01106 439 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-214ENST00000565274 AMPD1P23109 780 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 GNASQ5JWF2 1037 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 ZNF280DQ6N043 979 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 C1orf229Q6ZS94 237 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-214ENST00000565274 CENPQQ7L2Z9 268 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-214ENST00000565274 MSL3Q8N5Y2 521 aaKnown RBP6.38□□□□□ -1.39
CAPN3-214ENST00000565274 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-214ENST00000565274 CXorf38Q8TB03 319 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 CFHR5Q9BXR6 569 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 FEZ2Q9UHY8 353 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-214ENST00000565274 PHF24Q9UPV7 400 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 NINLQ9Y2I6 1382 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 MLH3Q9UHC1 1453 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 EFCAB6Q5THR3 1501 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 MAP3K4Q9Y6R4 1608 aa6.38□□□□□ -1.39
CAPN3-214ENST00000565274 ERVK-7P63135 1459 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 PLEKHH1Q9ULM0 1364 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 KRBA1A5PL33 1030 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 CREB3O43889 395 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 DHX16O60231 1041 aaKnown RBP6.37□□□□□ -1.39
CAPN3-214ENST00000565274 KIF4AO95239 1232 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 GNRH1P01148 92 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 CSB-PGBD3P0DP91 1061 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 LIG1P18858 919 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 PAX3P23760 479 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 GIMAP6Q6P9H5 292 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 GET4Q7L5D6 327 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-214ENST00000565274 PGBD3Q8N328 593 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 EDARADDQ8WWZ3 215 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 C14orf93Q9H972 538 aaKnown RBP6.37□□□□□ -1.39
CAPN3-214ENST00000565274 GOPCQ9HD26 462 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 MKL2Q9ULH7 1088 aa6.37□□□□□ -1.39
CAPN3-214ENST00000565274 ZNF518AQ6AHZ1 1483 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 ZMYM3Q14202 1370 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 A0A1B0GTH6 734 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 HMGB1P1B2RPK0 211 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 K7ELQ4 463 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 STAU1O95793 577 aaKnown RBP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 FURINP09958 794 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 BMP4P12644 408 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 BAG6P46379 1132 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 FLIIQ13045 1269 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 PDE3AQ14432 1141 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 GRIN2CQ14957 1233 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 WDR43Q15061 677 aaKnown RBP eCLIP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 C4orf17Q53FE4 359 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 CCDC181Q5TID7 509 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 WDR78Q5VTH9 848 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 NBPF6Q5VWK0 638 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 NBPF5PQ86XG9 351 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 SREK1Q8WXA9 508 aaKnown RBP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 ABHD17AQ96GS6 310 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 NBPF4Q96M43 638 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 CCDC85AQ96PX6 553 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-214ENST00000565274 CRBNQ96SW2 442 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 LRRC4BQ9NT99 713 aa6.36□□□□□ -1.39
CAPN3-214ENST00000565274 ADGRB3O60242 1522 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 ADGRL1O94910 1474 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 ZFYVE9O95405 1425 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 ARHGAP31Q2M1Z3 1444 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 ZNF500O60304 480 aaPredicted RBP6.35□□□□□ -1.39
CAPN3-214ENST00000565274 COL8A1P27658 744 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 MSX1P28360 303 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 ZKSCAN2Q63HK3 967 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 YY1AP1Q9H869 796 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 BSDC1Q9NW68 430 aaPredicted RBP6.35□□□□□ -1.39
CAPN3-214ENST00000565274 NDUFB9Q9Y6M9 179 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 IFT172Q9UG01 1749 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 MYOM1P52179 1685 aa6.35□□□□□ -1.39
CAPN3-214ENST00000565274 NSD2O96028 1365 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 KDM5AP29375 1690 aaKnown RBP6.34□□□□□ -1.39
CAPN3-214ENST00000565274 C2CD2LO14523 706 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 KIF3BO15066 747 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 SH3BP5O60239 455 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
CAPN3-214ENST00000565274 CTBSQ01459 385 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 NFKBIBQ15653 356 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 TSGA10IPQ3SY00 556 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 EFHC2Q5JST6 749 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 MTMR14Q8NCE2 650 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 ATL2Q8NHH9 583 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 PMM1Q92871 262 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 XAGE2Q96GT9 111 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 FHDC1Q9C0D6 1143 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-214ENST00000565274 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 METTL14Q9HCE5 456 aaKnown RBP6.34□□□□□ -1.39
CAPN3-214ENST00000565274 SNRKQ9NRH2 765 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 CEP126Q9P2H0 1117 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 KLHL42Q9P2K6 505 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 GGA1Q9UJY5 639 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 GDF2Q9UK05 429 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-214ENST00000565274 USP32Q8NFA0 1604 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 ADGRB1O14514 1584 aa6.34□□□□□ -1.39
CAPN3-214ENST00000565274 NKTRP30414 1462 aaKnown RBP6.34□□□□□ -1.4
CAPN3-214ENST00000565274 NOS1P29475 1434 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 ASXL2Q76L83 1435 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms