RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 PEAR1Q5VY43 1037 aaPredicted RBP7.65□□□□□ -1.18
PALB2-203ENST00000565038 GALNT12Q8IXK2 581 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 ASB16Q96NS5 453 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 CSRNP1Q96S65 589 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 SH2B1Q9NRF2 756 aaPredicted RBP7.65□□□□□ -1.18
PALB2-203ENST00000565038 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
PALB2-203ENST00000565038 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
PALB2-203ENST00000565038 PDE2AO00408 941 aaPredicted RBP7.64□□□□□ -1.19
PALB2-203ENST00000565038 CDC25BP30305 580 aa7.64□□□□□ -1.19
PALB2-203ENST00000565038 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
PALB2-203ENST00000565038 TMEM151AQ8N4L1 468 aa7.64□□□□□ -1.19
PALB2-203ENST00000565038 DCAF5Q96JK2 942 aa7.64□□□□□ -1.19
PALB2-203ENST00000565038 NPHS2Q9NP85 383 aa7.64□□□□□ -1.19
PALB2-203ENST00000565038 A0A0A0MRY4 1105 aa7.63□□□□□ -1.19
PALB2-203ENST00000565038 A0A1W2PP55 124 aa7.63□□□□□ -1.19
PALB2-203ENST00000565038 TXNDC11Q6PKC3 985 aa7.63□□□□□ -1.19
PALB2-203ENST00000565038 ILDR2Q71H61 639 aa7.63□□□□□ -1.19
PALB2-203ENST00000565038 CCDC74AQ96AQ1 378 aa7.63□□□□□ -1.19
PALB2-203ENST00000565038 DNAJC25Q9H1X3 360 aa7.63□□□□□ -1.19
PALB2-203ENST00000565038 PNMA6FA0A0J9YX94 578 aa7.62□□□□□ -1.19
PALB2-203ENST00000565038 CDC27P30260 824 aa7.62□□□□□ -1.19
PALB2-203ENST00000565038 MAPK8P45983 427 aa7.62□□□□□ -1.19
PALB2-203ENST00000565038 PRRT3Q5FWE3 981 aa7.62□□□□□ -1.19
PALB2-203ENST00000565038 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
PALB2-203ENST00000565038 EPS8L3Q8TE67 593 aaKnown RBP7.62□□□□□ -1.19
PALB2-203ENST00000565038 NXPE3Q969Y0 559 aa7.62□□□□□ -1.19
PALB2-203ENST00000565038 KRBA1A5PL33 1030 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 ANKRD33BA6NCL7 494 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 METTL12A8MUP2 240 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 LINC01387J3KSC0 135 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 PTPRAP18433 802 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 RAC1P63000 192 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 GRIK4Q16099 956 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 SETDB2Q96T68 719 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 PPME1Q9Y570 386 aa7.61□□□□□ -1.19
PALB2-203ENST00000565038 DEAF1O75398 565 aaPredicted RBP7.6□□□□□ -1.19
PALB2-203ENST00000565038 SPATA31C1P0DKV0 1188 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 EPHA1P21709 976 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 FMR1Q06787 632 aaKnown RBP eCLIP7.6□□□□□ -1.19
PALB2-203ENST00000565038 ENOX2Q16206 610 aaKnown RBP7.6□□□□□ -1.19
PALB2-203ENST00000565038 CCDC27Q2M243 656 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 PI16Q6UXB8 463 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 ADAM19Q9H013 955 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 EHD4Q9H223 541 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 WWC3Q9ULE0 1092 aa7.6□□□□□ -1.19
PALB2-203ENST00000565038 FAM177BA6PVY3 158 aa7.59□□□□□ -1.19
PALB2-203ENST00000565038 GADD45BO75293 160 aaPredicted RBP7.59□□□□□ -1.19
PALB2-203ENST00000565038 P4HBP07237 508 aaKnown RBP7.59□□□□□ -1.19
PALB2-203ENST00000565038 TRIM26Q12899 539 aaPredicted RBP7.59□□□□□ -1.19
PALB2-203ENST00000565038 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
PALB2-203ENST00000565038 LIN7BQ9HAP6 207 aa7.59□□□□□ -1.19
PALB2-203ENST00000565038 SETDB1Q15047 1291 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 SPRED3Q2MJR0 410 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 KIAA0319Q5VV43 1072 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 SHISA2Q6UWI4 295 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
PALB2-203ENST00000565038 FBXO11Q86XK2 927 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 CCNJLQ8IV13 435 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 CACTIN-AS1Q8N1I8 211 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 TCF12Q99081 682 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 CARD10Q9BWT7 1032 aa7.58□□□□□ -1.2
PALB2-203ENST00000565038 BHLHE41Q9C0J9 482 aaPredicted RBP7.58□□□□□ -1.2
PALB2-203ENST00000565038 APBA3O96018 575 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 ELNP15502 786 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 GRIA4P48058 902 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
PALB2-203ENST00000565038 ALYREFQ86V81 257 aaKnown RBP7.57□□□□□ -1.2
PALB2-203ENST00000565038 DTWD1Q8N5C7 304 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 BSNDQ8WZ55 320 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 SOX13Q9UN79 622 aa7.57□□□□□ -1.2
PALB2-203ENST00000565038 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 CHRNA4P43681 627 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 CABP4P57796 275 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 PLA2G4EQ3MJ16 856 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 VN1R5Q7Z5H4 357 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 GALNT11Q8NCW6 608 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 NLRP2Q9NX02 1062 aa7.56□□□□□ -1.2
PALB2-203ENST00000565038 A0A096LPE4 126 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 A0A1W2PPZ6 126 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 H3BRJ5 948 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 FSCN2O14926 492 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 ITGB2P05107 769 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 SELPP16109 830 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 GRM2Q14416 872 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 FAM117BQ6P1L5 589 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 CD163Q86VB7 1156 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 SLC7A3Q8WY07 619 aa7.55□□□□□ -1.2
PALB2-203ENST00000565038 DLL1O00548 723 aa7.54□□□□□ -1.2
PALB2-203ENST00000565038 LDHBP07195 334 aaKnown RBP7.54□□□□□ -1.2
PALB2-203ENST00000565038 ATP2B2Q01814 1243 aa7.54□□□□□ -1.2
PALB2-203ENST00000565038 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
PALB2-203ENST00000565038 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
PALB2-203ENST00000565038 SOX1O00570 391 aaPredicted RBP7.53□□□□□ -1.2
PALB2-203ENST00000565038 IKBKEQ14164 716 aa7.53□□□□□ -1.2
PALB2-203ENST00000565038 ALG1LQ6GMV1 187 aa7.53□□□□□ -1.2
PALB2-203ENST00000565038 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms