RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
NIP7-206ENST00000565034 MAP4K1Q92918 833 aa17.65■□□□□ 0.42
NIP7-206ENST00000565034 KCNB2Q92953 911 aa17.65■□□□□ 0.42
NIP7-206ENST00000565034 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
NIP7-206ENST00000565034 MINPP1Q9UNW1 487 aa17.65■□□□□ 0.42
NIP7-206ENST00000565034 POLRMTO00411 1230 aaKnown RBP17.64■□□□□ 0.41
NIP7-206ENST00000565034 MCAMP43121 646 aa17.64■□□□□ 0.41
NIP7-206ENST00000565034 PHKA1P46020 1223 aa17.64■□□□□ 0.41
NIP7-206ENST00000565034 PTH1RQ03431 593 aa17.64■□□□□ 0.41
NIP7-206ENST00000565034 GRAPQ13588 217 aa17.64■□□□□ 0.41
NIP7-206ENST00000565034 SCARF1Q14162 830 aa17.64■□□□□ 0.41
NIP7-206ENST00000565034 COL23A1Q86Y22 540 aaPredicted RBP17.64■□□□□ 0.41
NIP7-206ENST00000565034 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
NIP7-206ENST00000565034 PALD1Q9ULE6 856 aa17.64■□□□□ 0.41
NIP7-206ENST00000565034 DDR1Q08345 913 aa17.63■□□□□ 0.41
NIP7-206ENST00000565034 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
NIP7-206ENST00000565034 ANTXR1Q9H6X2 564 aa17.63■□□□□ 0.41
NIP7-206ENST00000565034 KCNJ4P48050 445 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 CCDC24Q8N4L8 307 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 RPGRQ92834 1020 aaKnown RBP17.62■□□□□ 0.41
NIP7-206ENST00000565034 GNL3LQ9NVN8 582 aaKnown RBP17.62■□□□□ 0.41
NIP7-206ENST00000565034 HMG20BQ9P0W2 317 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 RBM8AQ9Y5S9 174 aaKnown RBP17.62■□□□□ 0.41
NIP7-206ENST00000565034 SNX14Q9Y5W7 946 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
NIP7-206ENST00000565034 ZNF804BA4D1E1 1349 aa17.62■□□□□ 0.41
NIP7-206ENST00000565034 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 ZBTB22O15209 634 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
NIP7-206ENST00000565034 ZNF589Q86UQ0 364 aaPredicted RBP17.61■□□□□ 0.41
NIP7-206ENST00000565034 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 APPBP2Q92624 585 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
NIP7-206ENST00000565034 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 TM6SF1Q9BZW5 370 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 PNPLA7Q6ZV29 1317 aa17.61■□□□□ 0.41
NIP7-206ENST00000565034 CAVIN4Q5BKX8 364 aa17.6■□□□□ 0.41
NIP7-206ENST00000565034 DSCC1Q9BVC3 393 aa17.6■□□□□ 0.41
NIP7-206ENST00000565034 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
NIP7-206ENST00000565034 LRRC37AA6NMS7 1700 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 MAST3O60307 1309 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 KLRG2A4D1S0 409 aaPredicted RBP17.59■□□□□ 0.41
NIP7-206ENST00000565034 SEMA3EO15041 775 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 CD2BP2O95400 341 aaKnown RBP17.59■□□□□ 0.41
NIP7-206ENST00000565034 CYP2E1P05181 493 aaPredicted RBP17.59■□□□□ 0.41
NIP7-206ENST00000565034 HOXA10P31260 410 aaPredicted RBP17.59■□□□□ 0.41
NIP7-206ENST00000565034 NEK4P51957 841 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
NIP7-206ENST00000565034 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
NIP7-206ENST00000565034 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.41
NIP7-206ENST00000565034 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.4
NIP7-206ENST00000565034 SLC27A2O14975 620 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 ADD2P35612 726 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 BAG6P46379 1132 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.4
NIP7-206ENST00000565034 UBE3CQ15386 1083 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 TSGA10IPQ3SY00 556 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 PI16Q6UXB8 463 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 PIH1D3Q9NQM4 214 aaKnown RBP17.58■□□□□ 0.4
NIP7-206ENST00000565034 LEMD3Q9Y2U8 911 aa17.58■□□□□ 0.4
NIP7-206ENST00000565034 SNAP23O00161 211 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 PSMA5P28066 241 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 BCAMP50895 628 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 KRT32Q14532 448 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 EZH2Q15910 746 aaKnown RBP17.57■□□□□ 0.4
NIP7-206ENST00000565034 SLC15A2Q16348 729 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 RASEFQ8IZ41 740 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
NIP7-206ENST00000565034 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
NIP7-206ENST00000565034 XDHP47989 1333 aa17.56■□□□□ 0.4
NIP7-206ENST00000565034 BBOX1O75936 387 aa17.56■□□□□ 0.4
NIP7-206ENST00000565034 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
NIP7-206ENST00000565034 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
NIP7-206ENST00000565034 MAP3K12Q12852 859 aa17.56■□□□□ 0.4
NIP7-206ENST00000565034 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
NIP7-206ENST00000565034 DENND2AQ9ULE3 1009 aa17.56■□□□□ 0.4
NIP7-206ENST00000565034 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
NIP7-206ENST00000565034 RPAP1Q9BWH6 1393 aaPredicted RBP17.55■□□□□ 0.4
NIP7-206ENST00000565034 M0R2C6 588 aa17.55■□□□□ 0.4
NIP7-206ENST00000565034 IDH1O75874 414 aaKnown RBP17.55■□□□□ 0.4
NIP7-206ENST00000565034 CHGBP05060 677 aa17.55■□□□□ 0.4
NIP7-206ENST00000565034 FBXO33Q7Z6M2 555 aa17.55■□□□□ 0.4
NIP7-206ENST00000565034 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
NIP7-206ENST00000565034 OSBP2Q969R2 916 aa17.55■□□□□ 0.4
NIP7-206ENST00000565034 SLKQ9H2G2 1235 aaPredicted RBP17.55■□□□□ 0.4
NIP7-206ENST00000565034 CHMP5Q9NZZ3 219 aa17.55■□□□□ 0.4
NIP7-206ENST00000565034 CIZ1Q9ULV3 898 aaPredicted RBP17.55■□□□□ 0.4
NIP7-206ENST00000565034 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
NIP7-206ENST00000565034 MAST2Q6P0Q8 1798 aa17.54■□□□□ 0.4
NIP7-206ENST00000565034 MMP10P09238 476 aa17.54■□□□□ 0.4
NIP7-206ENST00000565034 PDE6AP16499 860 aa17.54■□□□□ 0.4
NIP7-206ENST00000565034 GYG1P46976 350 aa17.54■□□□□ 0.4
NIP7-206ENST00000565034 SLC9C2Q5TAH2 1124 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms