RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CARD6Q9BX69 1037 aa23.86■■□□□ 1.41
MAP1LC3B-206ENST00000564844 NRXN3Q9Y4C0 1643 aa23.86■■□□□ 1.41
MAP1LC3B-206ENST00000564844 KCNA6P17658 529 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 BMS1Q14692 1282 aaKnown RBP23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 HSP90AB3PQ58FF7 597 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 DIP2BQ9P265 1576 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 PNMA6AP0CW24 399 aaPredicted RBP23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 MNS1Q8NEH6 495 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 NAT10Q9H0A0 1025 aaKnown RBP23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.85■■□□□ 1.413e-9■□□□□ 8.9
MAP1LC3B-206ENST00000564844 CTAGE5O15320 804 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 TAF3Q5VWG9 929 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 LINS1Q8NG48 757 aa23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 MRPS27Q92552 414 aaKnown RBP23.85■■□□□ 1.41
MAP1LC3B-206ENST00000564844 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 KRT32Q14532 448 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 PXDNLA1KZ92 1463 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 TNRQ92752 1358 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 PLA2G4AP47712 749 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 ESCO1Q5FWF5 840 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 UBE3BQ7Z3V4 1068 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 DPF2Q92785 391 aa23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 ZNF396Q96N95 335 aaPredicted RBP23.84■■□□□ 1.41
MAP1LC3B-206ENST00000564844 CAVIN2O95810 425 aa23.83■■□□□ 1.41
MAP1LC3B-206ENST00000564844 C1orf141Q5JVX7 400 aa23.83■■□□□ 1.41
MAP1LC3B-206ENST00000564844 SIRT1Q96EB6 747 aa23.83■■□□□ 1.41
MAP1LC3B-206ENST00000564844 TIMM10P62072 90 aa23.83■■□□□ 1.41
MAP1LC3B-206ENST00000564844 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.83■■□□□ 1.41
MAP1LC3B-206ENST00000564844 ST5P78524 1137 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 MCMDC2Q4G0Z9 681 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 KIAA1468Q9P260 1216 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 ZNF609O15014 1411 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 FMR1NBQ8N0W7 255 aaPredicted RBP23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TMEM2Q9UHN6 1383 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 GSDMDP57764 484 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 PSME1Q06323 249 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 COPS6Q7L5N1 327 aa23.82■■□□□ 1.4
MAP1LC3B-206ENST00000564844 FANCGO15287 622 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 SLC3A2P08195 630 aaKnown RBP23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TNNI3KQ59H18 835 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TMCO3Q6UWJ1 677 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 DHX32Q7L7V1 743 aaKnown RBP23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 PDILTQ8N807 584 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 XAGE3Q8WTP9 111 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 FPGT-TNNI3KV9GXZ4 949 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 PFKFB2O60825 505 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 SERPINC1P01008 464 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 CAPN2P17655 700 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 CFAP100Q494V2 611 aa23.81■■□□□ 1.4
MAP1LC3B-206ENST00000564844 CHMP4AQ9BY43 222 aa23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 ZNF330Q9Y3S2 320 aaPredicted RBP23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 U3KPZ7 1027 aaPredicted RBP23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 SPATA31D1Q6ZQQ2 1576 aa23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 H2AFXP16104 143 aaPredicted RBP23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 SMARCC2Q8TAQ2 1214 aa23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TMEM232C9JQI7 657 aa23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TEX35Q5T0J7 233 aa23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 SNRKQ9NRH2 765 aa23.8■■□□□ 1.4
MAP1LC3B-206ENST00000564844 RXRAP19793 462 aa23.79■■□□□ 1.4
MAP1LC3B-206ENST00000564844 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
MAP1LC3B-206ENST00000564844 RNMTO43148 476 aaKnown RBP23.79■■□□□ 1.4
MAP1LC3B-206ENST00000564844 FANCCQ00597 558 aa23.79■■□□□ 1.4
MAP1LC3B-206ENST00000564844 FDPSP14324 419 aaKnown RBP23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 PDIA3P30101 505 aaKnown RBP23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 ZNF202O95125 648 aa23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 USPL1Q5W0Q7 1092 aa23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 AIFM3Q96NN9 605 aa23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 DDX58O95786 925 aaKnown RBP23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 ZC3H6P61129 1189 aaKnown RBP23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TRIM34Q9BYJ4 488 aa23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
MAP1LC3B-206ENST00000564844 E7EWF7 191 aa23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 OSBPL5Q9H0X9 879 aaPredicted RBP23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 ETF1P62495 437 aaKnown RBP23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 TSGA10IPQ3SY00 556 aa23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 NAA16Q6N069 864 aaPredicted RBP23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 CALCOCO1Q9P1Z2 691 aa23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 PTPRUQ92729 1446 aa23.77■■□□□ 1.4
MAP1LC3B-206ENST00000564844 CEMIPQ8WUJ3 1361 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 UBASH3AP57075 661 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 SPECC1Q5M775 1068 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 L2HGDHQ9H9P8 463 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 FAM53CQ9NYF3 392 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 EVCP57679 992 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
MAP1LC3B-206ENST00000564844 NEURL1BA8MQ27 555 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 C8orf76Q96K31 380 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ALDH8A1Q9H2A2 487 aaPredicted RBP23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ORC3Q9UBD5 711 aaPredicted RBP23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 SPTLC2O15270 562 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 NRDCO43847 1150 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ATP5JP18859 108 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CYP2C19P33261 490 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 PTPN12Q05209 780 aaKnown RBP23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 GCKRQ14397 625 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 PLEKHO1Q53GL0 409 aaPredicted RBP23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 LINC00301Q8NCQ3 95 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 TECPR2O15040 1411 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms