RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 KCNB2Q92953 911 aa18.7■□□□□ 0.58
COMMD4-210ENST00000564587 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
COMMD4-210ENST00000564587 ZKSCAN1P17029 563 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-210ENST00000564587 KCNJ4P48050 445 aa18.69■□□□□ 0.58
COMMD4-210ENST00000564587 HMG20BQ9P0W2 317 aa18.69■□□□□ 0.58
COMMD4-210ENST00000564587 MINPP1Q9UNW1 487 aa18.69■□□□□ 0.58
COMMD4-210ENST00000564587 ZBTB22O15209 634 aa18.68■□□□□ 0.58
COMMD4-210ENST00000564587 TAF5LO75529 589 aa18.68■□□□□ 0.58
COMMD4-210ENST00000564587 ZAP70P43403 619 aa18.68■□□□□ 0.58
COMMD4-210ENST00000564587 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
COMMD4-210ENST00000564587 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-210ENST00000564587 AKAP11Q9UKA4 1901 aa18.68■□□□□ 0.58
COMMD4-210ENST00000564587 MCAMP43121 646 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 PHKA1P46020 1223 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 GRAPQ13588 217 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 NECTIN1Q15223 517 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 ZNF827Q17R98 1081 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 CAVIN4Q5BKX8 364 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 GRAPLQ8TC17 118 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-210ENST00000564587 RPGRQ92834 1020 aaKnown RBP18.67■□□□□ 0.58
COMMD4-210ENST00000564587 TM6SF1Q9BZW5 370 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 NDUFB9Q9Y6M9 179 aa18.67■□□□□ 0.58
COMMD4-210ENST00000564587 A0A1B0GUL6 1792 aa18.66■□□□□ 0.58
COMMD4-210ENST00000564587 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
COMMD4-210ENST00000564587 NEK4P51957 841 aa18.66■□□□□ 0.58
COMMD4-210ENST00000564587 PTH1RQ03431 593 aa18.66■□□□□ 0.58
COMMD4-210ENST00000564587 CRY2Q49AN0 593 aa18.66■□□□□ 0.58
COMMD4-210ENST00000564587 COL23A1Q86Y22 540 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-210ENST00000564587 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
COMMD4-210ENST00000564587 RBM8AQ9Y5S9 174 aaKnown RBP18.66■□□□□ 0.58
COMMD4-210ENST00000564587 SNX14Q9Y5W7 946 aa18.66■□□□□ 0.58
COMMD4-210ENST00000564587 MYH7P12883 1935 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 SEMA3EO15041 775 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 YY1P25490 414 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 PSMA5P28066 241 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 SCARF1Q14162 830 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 KRT32Q14532 448 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 TMC4Q7Z404 712 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 SPATA5Q8NB90 893 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 APPBP2Q92624 585 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 PALD1Q9ULE6 856 aa18.65■□□□□ 0.58
COMMD4-210ENST00000564587 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-210ENST00000564587 IGSF3O75054 1194 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.57
COMMD4-210ENST00000564587 HOXA10P31260 410 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-210ENST00000564587 UBE3CQ15386 1083 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 TSGA10IPQ3SY00 556 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 CREB3L3Q68CJ9 461 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 CAMKK2Q96RR4 588 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 LEMD3Q9Y2U8 911 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 ZNF804BA4D1E1 1349 aa18.64■□□□□ 0.57
COMMD4-210ENST00000564587 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
COMMD4-210ENST00000564587 BBOX1O75936 387 aa18.63■□□□□ 0.57
COMMD4-210ENST00000564587 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-210ENST00000564587 DDR1Q08345 913 aa18.63■□□□□ 0.57
COMMD4-210ENST00000564587 MAP3K12Q12852 859 aa18.63■□□□□ 0.57
COMMD4-210ENST00000564587 PRPF40BQ6NWY9 871 aaKnown RBP18.63■□□□□ 0.57
COMMD4-210ENST00000564587 ZNF589Q86UQ0 364 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-210ENST00000564587 CRAMP1Q96RY5 1269 aa18.63■□□□□ 0.57
COMMD4-210ENST00000564587 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
COMMD4-210ENST00000564587 CIZ1Q9ULV3 898 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-210ENST00000564587 BAG6P46379 1132 aa18.62■□□□□ 0.57
COMMD4-210ENST00000564587 TMED8Q6PL24 325 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-210ENST00000564587 VPS37DQ86XT2 251 aa18.62■□□□□ 0.57
COMMD4-210ENST00000564587 BRIP1Q9BX63 1249 aa18.62■□□□□ 0.57
COMMD4-210ENST00000564587 DENND2AQ9ULE3 1009 aa18.62■□□□□ 0.57
COMMD4-210ENST00000564587 PARP3Q9Y6F1 533 aa18.62■□□□□ 0.57
COMMD4-210ENST00000564587 PDS5AQ29RF7 1337 aaKnown RBP18.62■□□□□ 0.57
COMMD4-210ENST00000564587 TAF1P21675 1872 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 QSER1Q2KHR3 1735 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 NRXN2Q9P2S2 1712 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 PNPLA7Q6ZV29 1317 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 SLC27A2O14975 620 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 ADD2P35612 726 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 BCAMP50895 628 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 RASGRF1Q13972 1273 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 WASHC4Q2M389 1173 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 CTNNA3Q9UI47 895 aa18.61■□□□□ 0.57
COMMD4-210ENST00000564587 MAST3O60307 1309 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 XDHP47989 1333 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 CD2BP2O95400 341 aaKnown RBP18.6■□□□□ 0.57
COMMD4-210ENST00000564587 SLC15A2Q16348 729 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 FBXO33Q7Z6M2 555 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 RASEFQ8IZ41 740 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 ZSWIM6Q9HCJ5 1215 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 CYP46A1Q9Y6A2 500 aa18.6■□□□□ 0.57
COMMD4-210ENST00000564587 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
COMMD4-210ENST00000564587 PDE6BP35913 854 aa18.59■□□□□ 0.57
COMMD4-210ENST00000564587 SLC9C2Q5TAH2 1124 aa18.59■□□□□ 0.57
COMMD4-210ENST00000564587 PI16Q6UXB8 463 aa18.59■□□□□ 0.57
COMMD4-210ENST00000564587 C15orf52Q6ZUT6 534 aaKnown RBP18.59■□□□□ 0.57
COMMD4-210ENST00000564587 SEC62Q99442 399 aaKnown RBP18.59■□□□□ 0.57
COMMD4-210ENST00000564587 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-210ENST00000564587 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
COMMD4-210ENST00000564587 PIH1D3Q9NQM4 214 aaKnown RBP18.59■□□□□ 0.57
COMMD4-210ENST00000564587 COL4A1P02462 1669 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms