RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 USP17L1Q7RTZ2 530 aa31.92■■■□□ 2.7
AC009041.3-201ENST00000564390 ZC3H15Q8WU90 426 aaKnown RBP31.92■■■□□ 2.7
AC009041.3-201ENST00000564390 FBXW7Q969H0 707 aa31.92■■■□□ 2.7
AC009041.3-201ENST00000564390 KIF4BQ2VIQ3 1234 aa31.91■■■□□ 2.7
AC009041.3-201ENST00000564390 PCNTO95613 3336 aa31.9■■■□□ 2.7
AC009041.3-201ENST00000564390 CST9Q5W186 159 aa31.9■■■□□ 2.7
AC009041.3-201ENST00000564390 MXD3Q9BW11 206 aa31.9■■■□□ 2.7
AC009041.3-201ENST00000564390 COA1Q9GZY4 146 aa31.9■■■□□ 2.7
AC009041.3-201ENST00000564390 BICC1Q9H694 974 aaKnown RBP31.9■■■□□ 2.7
AC009041.3-201ENST00000564390 VEGFBP49765 207 aa31.89■■■□□ 2.7
AC009041.3-201ENST00000564390 LDHAL6AQ6ZMR3 332 aa31.89■■■□□ 2.7
AC009041.3-201ENST00000564390 AGBL3Q8NEM8 1001 aa31.89■■■□□ 2.7
AC009041.3-201ENST00000564390 CT47B1P0C2W7 299 aaPredicted RBP31.88■■■□□ 2.69
AC009041.3-201ENST00000564390 HSPA1AP0DMV8 641 aaKnown RBP31.88■■■□□ 2.69
AC009041.3-201ENST00000564390 HSPA1BP0DMV9 641 aaKnown RBP31.88■■■□□ 2.69
AC009041.3-201ENST00000564390 GMLQ99445 158 aa31.88■■■□□ 2.69
AC009041.3-201ENST00000564390 ZNF408Q9H9D4 720 aa31.88■■■□□ 2.69
AC009041.3-201ENST00000564390 CNNM1Q9NRU3 951 aa31.88■■■□□ 2.69
AC009041.3-201ENST00000564390 ASTN2O75129 1339 aaPredicted RBP31.87■■■□□ 2.69
AC009041.3-201ENST00000564390 RASSF10A6NK89 507 aa31.87■■■□□ 2.69
AC009041.3-201ENST00000564390 PLIN1O60240 522 aa31.87■■■□□ 2.69
AC009041.3-201ENST00000564390 DLK2Q6UY11 383 aa31.87■■■□□ 2.69
AC009041.3-201ENST00000564390 CELF2O95319 508 aaKnown RBP31.86■■■□□ 2.69
AC009041.3-201ENST00000564390 DACT2Q5SW24 774 aa31.86■■■□□ 2.69
AC009041.3-201ENST00000564390 CDC37L1Q7L3B6 337 aa31.86■■■□□ 2.69
AC009041.3-201ENST00000564390 USP48Q86UV5 1035 aa31.86■■■□□ 2.69
AC009041.3-201ENST00000564390 ANKRD44Q8N8A2 993 aa31.86■■■□□ 2.69
AC009041.3-201ENST00000564390 IRS2Q9Y4H2 1338 aa31.85■■■□□ 2.69
AC009041.3-201ENST00000564390 ZNF280AP59817 542 aaPredicted RBP31.85■■■□□ 2.69
AC009041.3-201ENST00000564390 DEFB115Q30KQ5 88 aa31.85■■■□□ 2.69
AC009041.3-201ENST00000564390 USP44Q9H0E7 712 aa31.85■■■□□ 2.69
AC009041.3-201ENST00000564390 NOB1Q9ULX3 412 aaKnown RBP31.85■■■□□ 2.69
AC009041.3-201ENST00000564390 USP17L8P0C7I0 530 aa31.84■■■□□ 2.69
AC009041.3-201ENST00000564390 PUS3Q9BZE2 481 aaKnown RBP31.84■■■□□ 2.69
AC009041.3-201ENST00000564390 GGA3Q9NZ52 723 aa31.84■■■□□ 2.69
AC009041.3-201ENST00000564390 ADM5C9JUS6 153 aa31.83■■■□□ 2.69
AC009041.3-201ENST00000564390 RABL6Q3YEC7 729 aaPredicted RBP31.83■■■□□ 2.69
AC009041.3-201ENST00000564390 KRT26Q7Z3Y9 468 aa31.83■■■□□ 2.69
AC009041.3-201ENST00000564390 RARSP54136 660 aaKnown RBP31.82■■■□□ 2.68
AC009041.3-201ENST00000564390 STRIP1Q5VSL9 837 aa31.82■■■□□ 2.68
AC009041.3-201ENST00000564390 PAXIP1Q6ZW49 1069 aaPredicted RBP31.82■■■□□ 2.68
AC009041.3-201ENST00000564390 HNRNPUQ00839 825 aaKnown RBP eCLIP31.81■■■□□ 2.68
AC009041.3-201ENST00000564390 DCPSQ96C86 337 aaKnown RBP31.81■■■□□ 2.68
AC009041.3-201ENST00000564390 CD209Q9NNX6 404 aa31.81■■■□□ 2.68
AC009041.3-201ENST00000564390 MYOZ2Q9NPC6 264 aa31.81■■■□□ 2.68
AC009041.3-201ENST00000564390 TLL2Q9Y6L7 1015 aa31.81■■■□□ 2.68
AC009041.3-201ENST00000564390 POLR2AP24928 1970 aaKnown RBP31.8■■■□□ 2.68
AC009041.3-201ENST00000564390 GTF2IP78347 998 aa31.8■■■□□ 2.68
AC009041.3-201ENST00000564390 GRM1Q13255 1194 aa31.8■■■□□ 2.68
AC009041.3-201ENST00000564390 TTLL5Q6EMB2 1281 aa31.79■■■□□ 2.68
AC009041.3-201ENST00000564390 C15orf52Q6ZUT6 534 aaKnown RBP31.79■■■□□ 2.68
AC009041.3-201ENST00000564390 WDR33Q9C0J8 1336 aaKnown RBP31.78■■■□□ 2.68
AC009041.3-201ENST00000564390 SCARF1Q14162 830 aa31.78■■■□□ 2.68
AC009041.3-201ENST00000564390 CYP4F22Q6NT55 531 aa31.78■■■□□ 2.68
AC009041.3-201ENST00000564390 MYO3BQ8WXR4 1341 aa31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 BRPF1P55201 1214 aaPredicted RBP31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 ANGEL2Q5VTE6 544 aaKnown RBP31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 ZNF804AQ7Z570 1209 aa31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 KLHDC4Q8TBB5 520 aa31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 API5Q9BZZ5 524 aaKnown RBP31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 THSD7BQ9C0I4 1608 aa31.77■■■□□ 2.68
AC009041.3-201ENST00000564390 LRRC24Q50LG9 513 aa31.76■■■□□ 2.67
AC009041.3-201ENST00000564390 SAPCD2Q86UD0 394 aa31.76■■■□□ 2.67
AC009041.3-201ENST00000564390 CAPNS2Q96L46 248 aa31.76■■■□□ 2.67
AC009041.3-201ENST00000564390 KIAA0825Q8IV33 1275 aa31.75■■■□□ 2.67
AC009041.3-201ENST00000564390 SULF1Q8IWU6 871 aa31.75■■■□□ 2.67
AC009041.3-201ENST00000564390 RIPOR2Q9Y4F9 1068 aa31.75■■■□□ 2.67
AC009041.3-201ENST00000564390 KIF16BQ96L93 1317 aa31.75■■■□□ 2.67
AC009041.3-201ENST00000564390 OGFOD1Q8N543 542 aa31.74■■■□□ 2.67
AC009041.3-201ENST00000564390 SCAF8Q9UPN6 1271 aaKnown RBP31.74■■■□□ 2.67
AC009041.3-201ENST00000564390 JAG2Q9Y219 1238 aa31.74■■■□□ 2.67
AC009041.3-201ENST00000564390 MROH5Q6ZUA9 1318 aa31.73■■■□□ 2.67
AC009041.3-201ENST00000564390 UBTFL1P0CB47 393 aaPredicted RBP31.72■■■□□ 2.67
AC009041.3-201ENST00000564390 IL1R1P14778 569 aa31.72■■■□□ 2.67
AC009041.3-201ENST00000564390 NBPF9Q3BBW0 867 aa31.72■■■□□ 2.67
AC009041.3-201ENST00000564390 CERS5Q8N5B7 392 aa31.72■■■□□ 2.67
AC009041.3-201ENST00000564390 SASH1O94885 1247 aa31.71■■■□□ 2.67
AC009041.3-201ENST00000564390 GYG1P46976 350 aa31.71■■■□□ 2.67
AC009041.3-201ENST00000564390 UBE4AQ14139 1066 aa31.71■■■□□ 2.67
AC009041.3-201ENST00000564390 METTL24Q5JXM2 366 aa31.71■■■□□ 2.67
AC009041.3-201ENST00000564390 COL13A1Q5TAT6 717 aaPredicted RBP31.71■■■□□ 2.67
AC009041.3-201ENST00000564390 ECE1P42892 770 aa31.7■■■□□ 2.67
AC009041.3-201ENST00000564390 CDCA5Q96FF9 252 aa31.7■■■□□ 2.67
AC009041.3-201ENST00000564390 FOXN1O15353 648 aa31.69■■■□□ 2.66
AC009041.3-201ENST00000564390 BCAR3O75815 825 aa31.69■■■□□ 2.66
AC009041.3-201ENST00000564390 WNT10BO00744 389 aa31.68■■■□□ 2.66
AC009041.3-201ENST00000564390 MEIS3Q99687 375 aa31.68■■■□□ 2.66
AC009041.3-201ENST00000564390 GBA2Q9HCG7 927 aaPredicted RBP31.68■■■□□ 2.66
AC009041.3-201ENST00000564390 TNNQ9UQP3 1299 aa31.68■■■□□ 2.66
AC009041.3-201ENST00000564390 PITPNM2Q9BZ72 1349 aa31.68■■■□□ 2.66
AC009041.3-201ENST00000564390 AOC2O75106 756 aa31.67■■■□□ 2.66
AC009041.3-201ENST00000564390 RFX5P48382 616 aaPredicted RBP31.67■■■□□ 2.66
AC009041.3-201ENST00000564390 HUNKP57058 714 aa31.67■■■□□ 2.66
AC009041.3-201ENST00000564390 VGLL2Q8N8G2 317 aa31.67■■■□□ 2.66
AC009041.3-201ENST00000564390 HDAC9Q9UKV0 1011 aa31.67■■■□□ 2.66
AC009041.3-201ENST00000564390 F8W031 263 aaPredicted RBP31.66■■■□□ 2.66
AC009041.3-201ENST00000564390 ARHGAP45Q92619 1136 aa31.66■■■□□ 2.66
AC009041.3-201ENST00000564390 FRAT1Q92837 279 aaPredicted RBP31.66■■■□□ 2.66
AC009041.3-201ENST00000564390 AIDAQ96BJ3 306 aa31.66■■■□□ 2.66
AC009041.3-201ENST00000564390 WBP1LQ9NX94 342 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms