RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 USP17L1Q7RTZ2 530 aa25.21■■□□□ 1.63
SHCBP1-203ENST00000564272 ABT1Q9ULW3 272 aaKnown RBP25.21■■□□□ 1.63
SHCBP1-203ENST00000564272 CT47B1P0C2W7 299 aaPredicted RBP25.2■■□□□ 1.62
SHCBP1-203ENST00000564272 KIF4BQ2VIQ3 1234 aa25.2■■□□□ 1.62
SHCBP1-203ENST00000564272 AGBL3Q8NEM8 1001 aa25.2■■□□□ 1.62
SHCBP1-203ENST00000564272 COA1Q9GZY4 146 aa25.2■■□□□ 1.62
SHCBP1-203ENST00000564272 CST9Q5W186 159 aa25.19■■□□□ 1.62
SHCBP1-203ENST00000564272 FBXW7Q969H0 707 aa25.19■■□□□ 1.62
SHCBP1-203ENST00000564272 GMLQ99445 158 aa25.19■■□□□ 1.62
SHCBP1-203ENST00000564272 BICC1Q9H694 974 aaKnown RBP25.19■■□□□ 1.62
SHCBP1-203ENST00000564272 VEGFBP49765 207 aa25.18■■□□□ 1.62
SHCBP1-203ENST00000564272 LDHAL6AQ6ZMR3 332 aa25.18■■□□□ 1.62
SHCBP1-203ENST00000564272 ANKRD44Q8N8A2 993 aa25.18■■□□□ 1.62
SHCBP1-203ENST00000564272 MXD3Q9BW11 206 aa25.18■■□□□ 1.62
SHCBP1-203ENST00000564272 IRS2Q9Y4H2 1338 aa25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 RASSF10A6NK89 507 aa25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 ZNF280AP59817 542 aaPredicted RBP25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 DACT2Q5SW24 774 aa25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 CDC37L1Q7L3B6 337 aa25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 CNNM1Q9NRU3 951 aa25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 NOB1Q9ULX3 412 aaKnown RBP25.17■■□□□ 1.62
SHCBP1-203ENST00000564272 ASTN2O75129 1339 aaPredicted RBP25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 CELF2O95319 508 aaKnown RBP25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 HSPA1AP0DMV8 641 aaKnown RBP25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 HSPA1BP0DMV9 641 aaKnown RBP25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 DEFB115Q30KQ5 88 aa25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 RABL6Q3YEC7 729 aaPredicted RBP25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 DLK2Q6UY11 383 aa25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 USP48Q86UV5 1035 aa25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 USP44Q9H0E7 712 aa25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 ZNF408Q9H9D4 720 aa25.16■■□□□ 1.62
SHCBP1-203ENST00000564272 PLIN1O60240 522 aa25.15■■□□□ 1.62
SHCBP1-203ENST00000564272 USP17L8P0C7I0 530 aa25.15■■□□□ 1.62
SHCBP1-203ENST00000564272 PUS3Q9BZE2 481 aaKnown RBP25.15■■□□□ 1.62
SHCBP1-203ENST00000564272 RARSP54136 660 aaKnown RBP25.14■■□□□ 1.62
SHCBP1-203ENST00000564272 STRIP1Q5VSL9 837 aa25.14■■□□□ 1.62
SHCBP1-203ENST00000564272 KRT26Q7Z3Y9 468 aa25.14■■□□□ 1.62
SHCBP1-203ENST00000564272 GGA3Q9NZ52 723 aa25.14■■□□□ 1.62
SHCBP1-203ENST00000564272 POLR2AP24928 1970 aaKnown RBP25.14■■□□□ 1.61
SHCBP1-203ENST00000564272 PCNTO95613 3336 aa25.13■■□□□ 1.61
SHCBP1-203ENST00000564272 ADM5C9JUS6 153 aa25.13■■□□□ 1.61
SHCBP1-203ENST00000564272 C15orf52Q6ZUT6 534 aaKnown RBP25.13■■□□□ 1.61
SHCBP1-203ENST00000564272 TLL2Q9Y6L7 1015 aa25.13■■□□□ 1.61
SHCBP1-203ENST00000564272 BRPF1P55201 1214 aaPredicted RBP25.12■■□□□ 1.61
SHCBP1-203ENST00000564272 DCPSQ96C86 337 aaKnown RBP25.12■■□□□ 1.61
SHCBP1-203ENST00000564272 CD209Q9NNX6 404 aa25.12■■□□□ 1.61
SHCBP1-203ENST00000564272 MYOZ2Q9NPC6 264 aa25.12■■□□□ 1.61
SHCBP1-203ENST00000564272 GTF2IP78347 998 aa25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 SCARF1Q14162 830 aa25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 TTLL5Q6EMB2 1281 aa25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 PAXIP1Q6ZW49 1069 aaPredicted RBP25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 API5Q9BZZ5 524 aaKnown RBP25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 MYO3BQ8WXR4 1341 aa25.11■■□□□ 1.61
SHCBP1-203ENST00000564272 WDR33Q9C0J8 1336 aaKnown RBP25.1■■□□□ 1.61
SHCBP1-203ENST00000564272 ANGEL2Q5VTE6 544 aaKnown RBP25.09■■□□□ 1.61
SHCBP1-203ENST00000564272 CYP4F22Q6NT55 531 aa25.09■■□□□ 1.61
SHCBP1-203ENST00000564272 ZNF804AQ7Z570 1209 aa25.09■■□□□ 1.61
SHCBP1-203ENST00000564272 GRM1Q13255 1194 aa25.08■■□□□ 1.61
SHCBP1-203ENST00000564272 LRRC24Q50LG9 513 aa25.08■■□□□ 1.61
SHCBP1-203ENST00000564272 SAPCD2Q86UD0 394 aa25.08■■□□□ 1.61
SHCBP1-203ENST00000564272 KLHDC4Q8TBB5 520 aa25.08■■□□□ 1.61
SHCBP1-203ENST00000564272 CAPNS2Q96L46 248 aa25.08■■□□□ 1.61
SHCBP1-203ENST00000564272 RIPOR2Q9Y4F9 1068 aa25.08■■□□□ 1.61
SHCBP1-203ENST00000564272 THSD7BQ9C0I4 1608 aa25.08■■□□□ 1.6
SHCBP1-203ENST00000564272 SULF1Q8IWU6 871 aa25.07■■□□□ 1.6
SHCBP1-203ENST00000564272 KIF16BQ96L93 1317 aa25.07■■□□□ 1.6
SHCBP1-203ENST00000564272 IL1R1P14778 569 aa25.06■■□□□ 1.6
SHCBP1-203ENST00000564272 UBE4AQ14139 1066 aa25.06■■□□□ 1.6
SHCBP1-203ENST00000564272 KIAA0825Q8IV33 1275 aa25.06■■□□□ 1.6
SHCBP1-203ENST00000564272 OGFOD1Q8N543 542 aa25.06■■□□□ 1.6
SHCBP1-203ENST00000564272 JAG2Q9Y219 1238 aa25.06■■□□□ 1.6
SHCBP1-203ENST00000564272 MROH5Q6ZUA9 1318 aa25.06■■□□□ 1.6
SHCBP1-203ENST00000564272 UBTFL1P0CB47 393 aaPredicted RBP25.05■■□□□ 1.6
SHCBP1-203ENST00000564272 NBPF9Q3BBW0 867 aa25.05■■□□□ 1.6
SHCBP1-203ENST00000564272 CERS5Q8N5B7 392 aa25.05■■□□□ 1.6
SHCBP1-203ENST00000564272 SASH1O94885 1247 aa25.04■■□□□ 1.6
SHCBP1-203ENST00000564272 ECE1P42892 770 aa25.04■■□□□ 1.6
SHCBP1-203ENST00000564272 GYG1P46976 350 aa25.04■■□□□ 1.6
SHCBP1-203ENST00000564272 METTL24Q5JXM2 366 aa25.04■■□□□ 1.6
SHCBP1-203ENST00000564272 SCAF8Q9UPN6 1271 aaKnown RBP25.04■■□□□ 1.6
SHCBP1-203ENST00000564272 BCAR3O75815 825 aa25.03■■□□□ 1.6
SHCBP1-203ENST00000564272 RFX5P48382 616 aaPredicted RBP25.03■■□□□ 1.6
SHCBP1-203ENST00000564272 COL13A1Q5TAT6 717 aaPredicted RBP25.03■■□□□ 1.6
SHCBP1-203ENST00000564272 CDCA5Q96FF9 252 aa25.03■■□□□ 1.6
SHCBP1-203ENST00000564272 WNT10BO00744 389 aa25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 FOXN1O15353 648 aa25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 VGLL2Q8N8G2 317 aa25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 ARHGAP45Q92619 1136 aa25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 GBA2Q9HCG7 927 aaPredicted RBP25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 HDAC9Q9UKV0 1011 aa25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 PITPNM2Q9BZ72 1349 aa25.02■■□□□ 1.6
SHCBP1-203ENST00000564272 HHIPL1Q96JK4 782 aa25.01■■□□□ 1.59
SHCBP1-203ENST00000564272 MEIS3Q99687 375 aa25.01■■□□□ 1.59
SHCBP1-203ENST00000564272 WBP1LQ9NX94 342 aa25.01■■□□□ 1.59
SHCBP1-203ENST00000564272 TNNQ9UQP3 1299 aa25.01■■□□□ 1.59
SHCBP1-203ENST00000564272 LRRFIP2Q9Y608 721 aaKnown RBP25.01■■□□□ 1.59
SHCBP1-203ENST00000564272 AOC2O75106 756 aa25■■□□□ 1.59
SHCBP1-203ENST00000564272 HIBADHP31937 336 aaKnown RBP25■■□□□ 1.59
SHCBP1-203ENST00000564272 HUNKP57058 714 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms