RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
ABCA3-203ENST00000563623 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
ABCA3-203ENST00000563623 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
ABCA3-203ENST00000563623 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.21
ABCA3-203ENST00000563623 METTL22Q9BUU2 404 aaPredicted RBP13.77□□□□□ -0.21
ABCA3-203ENST00000563623 CTNNA3Q9UI47 895 aa13.77□□□□□ -0.21
ABCA3-203ENST00000563623 MED23Q9ULK4 1368 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 PAG1Q9NWQ8 432 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
ABCA3-203ENST00000563623 MARCKSP29966 332 aaPredicted RBP13.76□□□□□ -0.21
ABCA3-203ENST00000563623 PFKFB2O60825 505 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
ABCA3-203ENST00000563623 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
ABCA3-203ENST00000563623 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 MRFAP1L1Q96HT8 127 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
ABCA3-203ENST00000563623 GJB4Q9NTQ9 266 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 PCDHA7Q9UN72 937 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 DIP2BQ9P265 1576 aa13.76□□□□□ -0.21
ABCA3-203ENST00000563623 NPHP4O75161 1426 aaPredicted RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 APPP05067 770 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 KRT222Q8N1A0 295 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 ORC3Q9UBD5 711 aaPredicted RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 SLU7O95391 586 aaKnown RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 SERPINC1P01008 464 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 KBTBD3Q8NAB2 608 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 XPO4Q9C0E2 1151 aaKnown RBP13.75□□□□□ -0.21
ABCA3-203ENST00000563623 GOLGA8BA8MQT2 603 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 KIF20AO95235 890 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
ABCA3-203ENST00000563623 E7EWF7 191 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
ABCA3-203ENST00000563623 TNNT3P45378 269 aaPredicted RBP13.74□□□□□ -0.21
ABCA3-203ENST00000563623 NDUFA8P51970 172 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 NAA16Q6N069 864 aaPredicted RBP13.74□□□□□ -0.21
ABCA3-203ENST00000563623 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
ABCA3-203ENST00000563623 PDILTQ8N807 584 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 KLF18A0A0U1RQI7 1052 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 RBM43Q6ZSC3 357 aaKnown RBP13.74□□□□□ -0.21
ABCA3-203ENST00000563623 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 ZNF609O15014 1411 aa13.74□□□□□ -0.21
ABCA3-203ENST00000563623 GSDMDP57764 484 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 ERCC6LQ2NKX8 1250 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 TRERF1Q96PN7 1200 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 CFAP100Q494V2 611 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 ZBTB9Q96C00 473 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 HAUS7Q99871 368 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 LLPHQ9BRT6 129 aaKnown RBP13.73□□□□□ -0.21
ABCA3-203ENST00000563623 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 FMN2Q9NZ56 1722 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
ABCA3-203ENST00000563623 CTDNEP1O95476 244 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 KMT5BQ4FZB7 885 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 DHX40Q8IX18 779 aaKnown RBP13.73□□□□□ -0.21
ABCA3-203ENST00000563623 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
ABCA3-203ENST00000563623 SPTLC2O15270 562 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 RXRAP19793 462 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 PDIA3P30101 505 aaKnown RBP13.72□□□□□ -0.21
ABCA3-203ENST00000563623 CDC25BP30305 580 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 RGPD8O14715 1765 aaPredicted RBP13.72□□□□□ -0.21
ABCA3-203ENST00000563623 COL15A1P39059 1388 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 PDIA6Q15084 440 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 FBXO38Q6PIJ6 1188 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
ABCA3-203ENST00000563623 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
ABCA3-203ENST00000563623 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
ABCA3-203ENST00000563623 ATP2B1P20020 1258 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 CABP4P57796 275 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
ABCA3-203ENST00000563623 CCZ1BP86790 482 aa13.71□□□□□ -0.21
ABCA3-203ENST00000563623 CCZ1P86791 482 aaPredicted RBP13.71□□□□□ -0.21
ABCA3-203ENST00000563623 GOLGA8FQ08AF8 430 aa13.71□□□□□ -0.21
ABCA3-203ENST00000563623 GOLGA8DPQ0D2H9 430 aa13.71□□□□□ -0.21
ABCA3-203ENST00000563623 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.21
ABCA3-203ENST00000563623 SECISBP2LQ93073 1101 aaKnown RBP13.71□□□□□ -0.21
ABCA3-203ENST00000563623 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
ABCA3-203ENST00000563623 SARM1Q6SZW1 724 aa13.71□□□□□ -0.21
ABCA3-203ENST00000563623 ST7Q9NRC1 585 aa13.71□□□□□ -0.21
ABCA3-203ENST00000563623 POLR3GO15318 223 aaPredicted RBP13.71□□□□□ -0.22
ABCA3-203ENST00000563623 IMMTQ16891 758 aaKnown RBP13.71□□□□□ -0.22
ABCA3-203ENST00000563623 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.22
ABCA3-203ENST00000563623 UBXN4Q92575 508 aa13.71□□□□□ -0.22
ABCA3-203ENST00000563623 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.22
ABCA3-203ENST00000563623 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.22
ABCA3-203ENST00000563623 PRC1O43663 620 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms