RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CELA2BP08218 269 aaPredicted RBP9.46□□□□□ -0.9
LINC00557-201ENST00000563184 PERM1Q5SV97 790 aa9.46□□□□□ -0.9
LINC00557-201ENST00000563184 NXPE4Q6UWF7 544 aa9.46□□□□□ -0.9
LINC00557-201ENST00000563184 EHD4Q9H223 541 aa9.46□□□□□ -0.9
LINC00557-201ENST00000563184 ENAMQ9NRM1 1142 aa9.46□□□□□ -0.9
LINC00557-201ENST00000563184 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
LINC00557-201ENST00000563184 GIPC1O14908 333 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 SORBS3O60504 671 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 CTSHP09668 335 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
LINC00557-201ENST00000563184 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 LYPD4Q6UWN0 246 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 LPIN3Q9BQK8 851 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 PBX4Q9BYU1 374 aa9.45□□□□□ -0.9
LINC00557-201ENST00000563184 PRPF40BQ6NWY9 871 aaKnown RBP9.44□□□□□ -0.9
LINC00557-201ENST00000563184 ADAMTSL4Q6UY14 1074 aa9.44□□□□□ -0.9
LINC00557-201ENST00000563184 CCNJLQ8IV13 435 aa9.44□□□□□ -0.9
LINC00557-201ENST00000563184 PLD4Q96BZ4 506 aa9.44□□□□□ -0.9
LINC00557-201ENST00000563184 SPACA7Q96KW9 195 aa9.44□□□□□ -0.9
LINC00557-201ENST00000563184 LIN7BQ9HAP6 207 aa9.44□□□□□ -0.9
LINC00557-201ENST00000563184 GHRHP01286 108 aa9.43□□□□□ -0.9
LINC00557-201ENST00000563184 EIF4BP23588 611 aaKnown RBP9.43□□□□□ -0.9
LINC00557-201ENST00000563184 TMEM102Q8N9M5 508 aaPredicted RBP9.43□□□□□ -0.9
LINC00557-201ENST00000563184 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
LINC00557-201ENST00000563184 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
LINC00557-201ENST00000563184 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
LINC00557-201ENST00000563184 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
LINC00557-201ENST00000563184 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
LINC00557-201ENST00000563184 VTI1BQ9UEU0 232 aa9.43□□□□□ -0.9
LINC00557-201ENST00000563184 METTL12A8MUP2 240 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 SHISA8B8ZZ34 492 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 OIP5O43482 229 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 BCRP11274 1271 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 PSAPL1Q6NUJ1 521 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 BACH2Q9BYV9 841 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 SMG9Q9H0W8 520 aaKnown RBP9.42□□□□□ -0.9
LINC00557-201ENST00000563184 IGSF5Q9NSI5 407 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
LINC00557-201ENST00000563184 GRIA4P48058 902 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 TSNAXIP1Q2TAA8 658 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 ELMSAN1Q6PJG2 1045 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 C20orf204Q6ZNR8 217 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 GALNT6Q8NCL4 622 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 C3orf58Q8NDZ4 430 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 EDARADDQ8WWZ3 215 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 FAM8A1Q9UBU6 413 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
LINC00557-201ENST00000563184 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 PDE2AO00408 941 aaPredicted RBP9.4□□□□□ -0.9
LINC00557-201ENST00000563184 ALBP02768 609 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 USP17L7P0C7H9 530 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 SPRED3Q2MJR0 410 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 CEP135Q66GS9 1140 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 NUDT8Q8WV74 236 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.9
LINC00557-201ENST00000563184 RBSNQ9H1K0 784 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 TRIM33Q9UPN9 1127 aa9.4□□□□□ -0.9
LINC00557-201ENST00000563184 ALAS2P22557 587 aa9.39□□□□□ -0.91
LINC00557-201ENST00000563184 FCGRTP55899 365 aa9.39□□□□□ -0.91
LINC00557-201ENST00000563184 GRIK5Q16478 980 aa9.39□□□□□ -0.91
LINC00557-201ENST00000563184 TTC9Q92623 222 aa9.39□□□□□ -0.91
LINC00557-201ENST00000563184 CRELD1Q96HD1 420 aa9.39□□□□□ -0.91
LINC00557-201ENST00000563184 BCL11AQ9H165 835 aa9.39□□□□□ -0.91
LINC00557-201ENST00000563184 GSK3AP49840 483 aa9.38□□□□□ -0.91
LINC00557-201ENST00000563184 C8orf86Q6ZUL3 223 aa9.38□□□□□ -0.91
LINC00557-201ENST00000563184 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
LINC00557-201ENST00000563184 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
LINC00557-201ENST00000563184 A0A096LPE4 126 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 A0A1W2PPZ6 126 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 SMNDC1O75940 238 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00557-201ENST00000563184 ITPKAP23677 461 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 GSTT1P30711 240 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 MICALL1Q8N3F8 863 aa9.37□□□□□ -0.91
LINC00557-201ENST00000563184 RGS9O75916 674 aaPredicted RBP9.36□□□□□ -0.91
LINC00557-201ENST00000563184 HOXB4P17483 251 aaPredicted RBP9.36□□□□□ -0.91
LINC00557-201ENST00000563184 ITGAEP38570 1179 aa9.36□□□□□ -0.91
LINC00557-201ENST00000563184 ASAP3Q8TDY4 903 aa9.36□□□□□ -0.91
LINC00557-201ENST00000563184 ADAM19Q9H013 955 aa9.36□□□□□ -0.91
LINC00557-201ENST00000563184 MUC3BQ9H195 1237 aa9.36□□□□□ -0.91
LINC00557-201ENST00000563184 JPH1Q9HDC5 661 aaPredicted RBP9.36□□□□□ -0.91
LINC00557-201ENST00000563184 SOX13Q9UN79 622 aa9.36□□□□□ -0.91
LINC00557-201ENST00000563184 AFF1P51825 1210 aaKnown RBP9.35□□□□□ -0.91
LINC00557-201ENST00000563184 RASSF7Q02833 373 aa9.35□□□□□ -0.91
LINC00557-201ENST00000563184 PTPN12Q05209 780 aaKnown RBP9.35□□□□□ -0.91
LINC00557-201ENST00000563184 TMEM87AQ8NBN3 555 aa9.35□□□□□ -0.91
LINC00557-201ENST00000563184 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
LINC00557-201ENST00000563184 PPP4R2Q9NY27 417 aa9.35□□□□□ -0.91
LINC00557-201ENST00000563184 USP31Q70CQ4 1352 aa9.35□□□□□ -0.91
LINC00557-201ENST00000563184 M0R082 166 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 XRCC5P13010 732 aaKnown RBP9.34□□□□□ -0.91
LINC00557-201ENST00000563184 BAG6P46379 1132 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 COL9A3Q14050 684 aaPredicted RBP9.34□□□□□ -0.91
LINC00557-201ENST00000563184 GDF6Q6KF10 455 aaPredicted RBP9.34□□□□□ -0.91
LINC00557-201ENST00000563184 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 VN1R5Q7Z5H4 357 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 TMEM151AQ8N4L1 468 aa9.34□□□□□ -0.91
LINC00557-201ENST00000563184 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms