RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 POLRMTO00411 1230 aaKnown RBP11.47□□□□□ -0.57
CDH13-205ENST00000562307 ST18O60284 1047 aa11.47□□□□□ -0.57
CDH13-205ENST00000562307 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDH13-205ENST00000562307 TTF1Q15361 905 aaPredicted RBP11.47□□□□□ -0.57
CDH13-205ENST00000562307 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
CDH13-205ENST00000562307 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
CDH13-205ENST00000562307 COL23A1Q86Y22 540 aaPredicted RBP11.47□□□□□ -0.57
CDH13-205ENST00000562307 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
CDH13-205ENST00000562307 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
CDH13-205ENST00000562307 SNX14Q9Y5W7 946 aa11.47□□□□□ -0.57
CDH13-205ENST00000562307 CYP2E1P05181 493 aaPredicted RBP11.46□□□□□ -0.57
CDH13-205ENST00000562307 MCM2P49736 904 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 DDR1Q08345 913 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 TSGA10IPQ3SY00 556 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 CAMKK2Q96RR4 588 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 TM6SF1Q9BZW5 370 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 HMG20BQ9P0W2 317 aa11.46□□□□□ -0.57
CDH13-205ENST00000562307 ZNF804BA4D1E1 1349 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 SNAP23O00161 211 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 HOXA10P31260 410 aaPredicted RBP11.45□□□□□ -0.58
CDH13-205ENST00000562307 DDIT3P35638 169 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 NEK4P51957 841 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 ST5P78524 1137 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 GRAPQ13588 217 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 ZSCAN25Q6NSZ9 544 aa11.45□□□□□ -0.58
CDH13-205ENST00000562307 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
CDH13-205ENST00000562307 SEC62Q99442 399 aaKnown RBP11.45□□□□□ -0.58
CDH13-205ENST00000562307 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
CDH13-205ENST00000562307 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 PNPLA7Q6ZV29 1317 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 TNRC6CQ9HCJ0 1690 aaKnown RBP11.44□□□□□ -0.58
CDH13-205ENST00000562307 SLC27A2O14975 620 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 NPHP1O15259 732 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 CHGBP05060 677 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 BCAMP50895 628 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 CREB3L3Q68CJ9 461 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 PI16Q6UXB8 463 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 FBXO33Q7Z6M2 555 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 DSCC1Q9BVC3 393 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDH13-205ENST00000562307 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
CDH13-205ENST00000562307 AKAP11Q9UKA4 1901 aa11.44□□□□□ -0.58
CDH13-205ENST00000562307 MAST3O60307 1309 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
CDH13-205ENST00000562307 ADD2P35612 726 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 RASGRF1Q13972 1273 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 UBE3CQ15386 1083 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 RNF20Q5VTR2 975 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
CDH13-205ENST00000562307 APPBP2Q92624 585 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 OSBP2Q969R2 916 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 TTC14Q96N46 770 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
CDH13-205ENST00000562307 PIH1D3Q9NQM4 214 aaKnown RBP11.43□□□□□ -0.58
CDH13-205ENST00000562307 PDS5AQ29RF7 1337 aaKnown RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 A0A1B0GUL6 1792 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 SEMA3EO15041 775 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 BBOX1O75936 387 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 KCNJ4P48050 445 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 SLC15A2Q16348 729 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 CAVIN4Q5BKX8 364 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 CCDC129Q6ZRS4 1044 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 C15orf52Q6ZUT6 534 aaKnown RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 RPGRQ92834 1020 aaKnown RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 RBM17Q96I25 401 aaKnown RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 FAM84BQ96KN1 310 aaPredicted RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 BRIP1Q9BX63 1249 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 ALDH8A1Q9H2A2 487 aaPredicted RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
CDH13-205ENST00000562307 LEMD3Q9Y2U8 911 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 NRXN2Q9P2S2 1712 aa11.42□□□□□ -0.58
CDH13-205ENST00000562307 TCRBV5S4A2TA0A5A2 114 aa11.41□□□□□ -0.58
CDH13-205ENST00000562307 WTIPA6NIX2 430 aaPredicted RBP11.41□□□□□ -0.58
CDH13-205ENST00000562307 M0R2C6 588 aa11.41□□□□□ -0.58
CDH13-205ENST00000562307 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
CDH13-205ENST00000562307 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
CDH13-205ENST00000562307 CUL4AQ13619 759 aa11.41□□□□□ -0.58
CDH13-205ENST00000562307 TMC4Q7Z404 712 aa11.41□□□□□ -0.58
CDH13-205ENST00000562307 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
CDH13-205ENST00000562307 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
CDH13-205ENST00000562307 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
CDH13-205ENST00000562307 TAF1P21675 1872 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 IGSF3O75054 1194 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 PDE6AP16499 860 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 PSMA5P28066 241 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 GYG1P46976 350 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 MAP3K12Q12852 859 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 KRT32Q14532 448 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 ADCK5Q3MIX3 580 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 SLC9C2Q5TAH2 1124 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 VPS53Q5VIR6 699 aa11.4□□□□□ -0.58
CDH13-205ENST00000562307 UPF3BQ9BZI7 483 aaKnown RBP11.4□□□□□ -0.58
CDH13-205ENST00000562307 PUS7LQ9H0K6 701 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms