RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 AK2P54819 239 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP4-202ENST00000561691 C4BP0C0L5 1744 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 TRAK2O60296 914 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 ZAP70P43403 619 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 ST3GAL1Q11201 340 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 SLC10A5Q5PT55 438 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 CWC22Q9HCG8 908 aaKnown RBP12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 HELLSQ9NRZ9 838 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 MAST3O60307 1309 aa12.24□□□□□ -0.45
TUBGCP4-202ENST00000561691 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 SNAP23O00161 211 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 RNF113AO15541 343 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 LARGE1O95461 756 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 VPS53Q5VIR6 699 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 OSBP2Q969R2 916 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 JAKMIP1Q96N16 626 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 GZF1Q9H116 711 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 CASZ1Q86V15 1759 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 ARID4AP29374 1257 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 CCDC158Q5M9N0 1113 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 UTP14CQ5TAP6 766 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 HELBQ8NG08 1087 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 QTRT2Q9H974 415 aaKnown RBP12.23□□□□□ -0.45
TUBGCP4-202ENST00000561691 EP400Q96L91 3159 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 A0A1B0GUL6 1792 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 M0R2C6 588 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 GNPATO15228 680 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 PHKA1P46020 1223 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 CCDC152Q4G0S7 254 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 LPIN2Q92539 896 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 ALDH8A1Q9H2A2 487 aaPredicted RBP12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 BRWD3Q6RI45 1802 aa12.22□□□□□ -0.45
TUBGCP4-202ENST00000561691 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
TUBGCP4-202ENST00000561691 CYP21A2P08686 494 aa12.21□□□□□ -0.45
TUBGCP4-202ENST00000561691 CCDC102BQ68D86 513 aa12.21□□□□□ -0.45
TUBGCP4-202ENST00000561691 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
TUBGCP4-202ENST00000561691 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
TUBGCP4-202ENST00000561691 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.46
TUBGCP4-202ENST00000561691 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.46
TUBGCP4-202ENST00000561691 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.46
TUBGCP4-202ENST00000561691 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.46
TUBGCP4-202ENST00000561691 HMG20BQ9P0W2 317 aa12.21□□□□□ -0.46
TUBGCP4-202ENST00000561691 PDIA4P13667 645 aaKnown RBP12.2□□□□□ -0.46
TUBGCP4-202ENST00000561691 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
TUBGCP4-202ENST00000561691 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
TUBGCP4-202ENST00000561691 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
TUBGCP4-202ENST00000561691 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
TUBGCP4-202ENST00000561691 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
TUBGCP4-202ENST00000561691 WTIPA6NIX2 430 aaPredicted RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 BRD1O95696 1058 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 NUCB2P80303 420 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 TOB2Q14106 344 aaPredicted RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 TAF1P21675 1872 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 TM4SF1P30408 202 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 CHRNDQ07001 517 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 DMTNQ08495 405 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 MTERF4Q7Z6M4 381 aaKnown RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 PPP1R9BQ96SB3 815 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 PUS7LQ9H0K6 701 aaKnown RBP12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
TUBGCP4-202ENST00000561691 UBR3Q6ZT12 1888 aa12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 ADD2P35612 726 aa12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 ME3Q16798 604 aa12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 FAM196AQ6ZSG2 479 aa12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZSCAN30Q86W11 494 aa12.18□□□□□ -0.46
TUBGCP4-202ENST00000561691 DOCK2Q92608 1830 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 DDX11L8A8MPP1 907 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 ZFYP08048 801 aaPredicted RBP12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 KCNJ4P48050 445 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 RASGRF1Q13972 1273 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 PROM2Q8N271 834 aa12.17□□□□□ -0.46
TUBGCP4-202ENST00000561691 APPBP2Q92624 585 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms