RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
FANCA-206ENST00000561660 LDHAL6AQ6ZMR3 332 aa22.7■■□□□ 1.22
FANCA-206ENST00000561660 USP17L1Q7RTZ2 530 aa22.7■■□□□ 1.22
FANCA-206ENST00000561660 COA1Q9GZY4 146 aa22.7■■□□□ 1.22
FANCA-206ENST00000561660 MKRN1Q9UHC7 482 aaKnown RBP22.7■■□□□ 1.22
FANCA-206ENST00000561660 ZNF609O15014 1411 aa22.69■■□□□ 1.22
FANCA-206ENST00000561660 MXD3Q9BW11 206 aa22.69■■□□□ 1.22
FANCA-206ENST00000561660 GLIS2Q9BZE0 524 aaPredicted RBP22.69■■□□□ 1.22
FANCA-206ENST00000561660 PUS3Q9BZE2 481 aaKnown RBP22.69■■□□□ 1.22
FANCA-206ENST00000561660 ZNF280AP59817 542 aaPredicted RBP22.68■■□□□ 1.22
FANCA-206ENST00000561660 TAF7LQ5H9L4 462 aa22.68■■□□□ 1.22
FANCA-206ENST00000561660 DACT2Q5SW24 774 aa22.68■■□□□ 1.22
FANCA-206ENST00000561660 RBM26Q5T8P6 1007 aaKnown RBP22.68■■□□□ 1.22
FANCA-206ENST00000561660 CST9Q5W186 159 aa22.68■■□□□ 1.22
FANCA-206ENST00000561660 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
FANCA-206ENST00000561660 CNTNAP1P78357 1384 aa22.67■■□□□ 1.22
FANCA-206ENST00000561660 KCNJ4P48050 445 aa22.67■■□□□ 1.22
FANCA-206ENST00000561660 C15orf52Q6ZUT6 534 aaKnown RBP22.67■■□□□ 1.22
FANCA-206ENST00000561660 DLK2Q6UY11 383 aa22.66■■□□□ 1.22
FANCA-206ENST00000561660 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
FANCA-206ENST00000561660 CNNM1Q9NRU3 951 aa22.66■■□□□ 1.22
FANCA-206ENST00000561660 RIPOR2Q9Y4F9 1068 aa22.66■■□□□ 1.22
FANCA-206ENST00000561660 ASTN2O75129 1339 aaPredicted RBP22.65■■□□□ 1.22
FANCA-206ENST00000561660 PLIN1O60240 522 aa22.65■■□□□ 1.22
FANCA-206ENST00000561660 KIF4BQ2VIQ3 1234 aa22.65■■□□□ 1.22
FANCA-206ENST00000561660 CD209Q9NNX6 404 aa22.65■■□□□ 1.22
FANCA-206ENST00000561660 PSME4Q14997 1843 aa22.64■■□□□ 1.22
FANCA-206ENST00000561660 BCAR3O75815 825 aa22.64■■□□□ 1.21
FANCA-206ENST00000561660 STRIP1Q5VSL9 837 aa22.64■■□□□ 1.21
FANCA-206ENST00000561660 USP48Q86UV5 1035 aa22.64■■□□□ 1.21
FANCA-206ENST00000561660 RASSF10A6NK89 507 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 USP17L8P0C7I0 530 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 LRRC24Q50LG9 513 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 CDC37L1Q7L3B6 337 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 KLHDC4Q8TBB5 520 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 ARHGAP45Q92619 1136 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 A0A1B0GUL6 1792 aa22.63■■□□□ 1.21
FANCA-206ENST00000561660 ZNF646O15015 1829 aaPredicted RBP22.62■■□□□ 1.21
FANCA-206ENST00000561660 RFX5P48382 616 aaPredicted RBP22.62■■□□□ 1.21
FANCA-206ENST00000561660 VEGFBP49765 207 aa22.62■■□□□ 1.21
FANCA-206ENST00000561660 TTLL5Q6EMB2 1281 aa22.62■■□□□ 1.21
FANCA-206ENST00000561660 FBXW7Q969H0 707 aa22.62■■□□□ 1.21
FANCA-206ENST00000561660 TNNQ9UQP3 1299 aa22.62■■□□□ 1.21
FANCA-206ENST00000561660 GTF2IP78347 998 aa22.61■■□□□ 1.21
FANCA-206ENST00000561660 MYOZ2Q9NPC6 264 aa22.61■■□□□ 1.21
FANCA-206ENST00000561660 ABT1Q9ULW3 272 aaKnown RBP22.61■■□□□ 1.21
FANCA-206ENST00000561660 KIF16BQ96L93 1317 aa22.6■■□□□ 1.21
FANCA-206ENST00000561660 CELF2O95319 508 aaKnown RBP22.6■■□□□ 1.21
FANCA-206ENST00000561660 IL1R1P14778 569 aa22.6■■□□□ 1.21
FANCA-206ENST00000561660 SCARF1Q14162 830 aa22.6■■□□□ 1.21
FANCA-206ENST00000561660 DEFB115Q30KQ5 88 aa22.6■■□□□ 1.21
FANCA-206ENST00000561660 ADM5C9JUS6 153 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 UBE4AQ14139 1066 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
FANCA-206ENST00000561660 KRT26Q7Z3Y9 468 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 CERS5Q8N5B7 392 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 MEIS3Q99687 375 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 GGA3Q9NZ52 723 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 TLL2Q9Y6L7 1015 aa22.59■■□□□ 1.21
FANCA-206ENST00000561660 MROH5Q6ZUA9 1318 aa22.58■■□□□ 1.21
FANCA-206ENST00000561660 UBTFL1P0CB47 393 aaPredicted RBP22.58■■□□□ 1.21
FANCA-206ENST00000561660 TRIM27P14373 513 aa22.58■■□□□ 1.21
FANCA-206ENST00000561660 ZNF804AQ7Z570 1209 aa22.58■■□□□ 1.21
FANCA-206ENST00000561660 VGLL2Q8N8G2 317 aa22.58■■□□□ 1.21
FANCA-206ENST00000561660 MYO3BQ8WXR4 1341 aa22.57■■□□□ 1.2
FANCA-206ENST00000561660 GYG1P46976 350 aa22.57■■□□□ 1.2
FANCA-206ENST00000561660 PTPN12Q05209 780 aaKnown RBP22.57■■□□□ 1.2
FANCA-206ENST00000561660 ANGEL2Q5VTE6 544 aaKnown RBP22.57■■□□□ 1.2
FANCA-206ENST00000561660 DCPSQ96C86 337 aaKnown RBP22.57■■□□□ 1.2
FANCA-206ENST00000561660 FAM84BQ96KN1 310 aaPredicted RBP22.57■■□□□ 1.2
FANCA-206ENST00000561660 ZNF408Q9H9D4 720 aa22.57■■□□□ 1.2
FANCA-206ENST00000561660 LRRFIP2Q9Y608 721 aaKnown RBP22.57■■□□□ 1.2
FANCA-206ENST00000561660 ZBED9Q6R2W3 1325 aa22.57■■□□□ 1.2
FANCA-206ENST00000561660 HSPA1AP0DMV8 641 aaKnown RBP22.56■■□□□ 1.2
FANCA-206ENST00000561660 HSPA1BP0DMV9 641 aaKnown RBP22.56■■□□□ 1.2
FANCA-206ENST00000561660 NBPF9Q3BBW0 867 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 METTL24Q5JXM2 366 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 ATF7IPQ6VMQ6 1270 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 SAPCD2Q86UD0 394 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 JAG2Q9Y219 1238 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 TRPM7Q96QT4 1865 aa22.56■■□□□ 1.2
FANCA-206ENST00000561660 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
FANCA-206ENST00000561660 POLR2AP24928 1970 aaKnown RBP22.54■■□□□ 1.2
FANCA-206ENST00000561660 IPO8O15397 1037 aaKnown RBP22.54■■□□□ 1.2
FANCA-206ENST00000561660 PDE8BO95263 885 aa22.54■■□□□ 1.2
FANCA-206ENST00000561660 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
FANCA-206ENST00000561660 TDRD7Q8NHU6 1098 aaKnown RBP22.54■■□□□ 1.2
FANCA-206ENST00000561660 SCAF8Q9UPN6 1271 aaKnown RBP22.54■■□□□ 1.2
FANCA-206ENST00000561660 WDR33Q9C0J8 1336 aaKnown RBP22.54■■□□□ 1.2
FANCA-206ENST00000561660 EYA2O00167 538 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 WNT10BO00744 389 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 SASH1O94885 1247 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 HIBADHP31937 336 aaKnown RBP22.53■■□□□ 1.2
FANCA-206ENST00000561660 CYP4F22Q6NT55 531 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 ATG9AQ7Z3C6 839 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 FBXO33Q7Z6M2 555 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 SULF1Q8IWU6 871 aa22.53■■□□□ 1.2
FANCA-206ENST00000561660 ZBED3Q96IU2 234 aaPredicted RBP22.53■■□□□ 1.2
FANCA-206ENST00000561660 CLUAP1Q96AJ1 413 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms