RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 ZNF280AP59817 542 aaPredicted RBP26.02■■□□□ 1.76
TPM1-232ENST00000561425 TAF5LO75529 589 aa26.01■■□□□ 1.75
TPM1-232ENST00000561425 SAMD7Q7Z3H4 446 aa26.01■■□□□ 1.75
TPM1-232ENST00000561425 RIPOR2Q9Y4F9 1068 aa26.01■■□□□ 1.75
TPM1-232ENST00000561425 SNAP23O00161 211 aa26■■□□□ 1.75
TPM1-232ENST00000561425 EGFRP00533 1210 aa26■■□□□ 1.75
TPM1-232ENST00000561425 DACT2Q5SW24 774 aa26■■□□□ 1.75
TPM1-232ENST00000561425 STRIP1Q5VSL9 837 aa26■■□□□ 1.75
TPM1-232ENST00000561425 HELBQ8NG08 1087 aaPredicted RBP26■■□□□ 1.75
TPM1-232ENST00000561425 KIF16BQ96L93 1317 aa25.99■■□□□ 1.75
TPM1-232ENST00000561425 TAF7LQ5H9L4 462 aa25.99■■□□□ 1.75
TPM1-232ENST00000561425 CNNM1Q9NRU3 951 aa25.99■■□□□ 1.75
TPM1-232ENST00000561425 PSME4Q14997 1843 aa25.99■■□□□ 1.75
TPM1-232ENST00000561425 INTS3Q68E01 1043 aaKnown RBP25.98■■□□□ 1.75
TPM1-232ENST00000561425 PUS3Q9BZE2 481 aaKnown RBP25.98■■□□□ 1.75
TPM1-232ENST00000561425 CD209Q9NNX6 404 aa25.98■■□□□ 1.75
TPM1-232ENST00000561425 FMR1Q06787 632 aaKnown RBP eCLIP25.97■■□□□ 1.75
TPM1-232ENST00000561425 CST9Q5W186 159 aa25.97■■□□□ 1.75
TPM1-232ENST00000561425 ZBED9Q6R2W3 1325 aa25.96■■□□□ 1.75
TPM1-232ENST00000561425 TRAF5O00463 557 aa25.96■■□□□ 1.75
TPM1-232ENST00000561425 KCNJ4P48050 445 aa25.96■■□□□ 1.75
TPM1-232ENST00000561425 TBC1D10BQ4KMP7 808 aaPredicted RBP25.96■■□□□ 1.75
TPM1-232ENST00000561425 CDC37L1Q7L3B6 337 aa25.96■■□□□ 1.75
TPM1-232ENST00000561425 CNTNAP1P78357 1384 aa25.95■■□□□ 1.75
TPM1-232ENST00000561425 BCAR3O75815 825 aa25.95■■□□□ 1.74
TPM1-232ENST00000561425 USP17L8P0C7I0 530 aa25.95■■□□□ 1.74
TPM1-232ENST00000561425 IL1R1P14778 569 aa25.95■■□□□ 1.74
TPM1-232ENST00000561425 RFX5P48382 616 aaPredicted RBP25.95■■□□□ 1.74
TPM1-232ENST00000561425 MMP14P50281 582 aa25.95■■□□□ 1.74
TPM1-232ENST00000561425 UBE4AQ14139 1066 aa25.95■■□□□ 1.74
TPM1-232ENST00000561425 MROH5Q6ZUA9 1318 aa25.94■■□□□ 1.74
TPM1-232ENST00000561425 MYO3BQ8WXR4 1341 aa25.94■■□□□ 1.74
TPM1-232ENST00000561425 RASSF10A6NK89 507 aa25.94■■□□□ 1.74
TPM1-232ENST00000561425 KIF4BQ2VIQ3 1234 aa25.94■■□□□ 1.74
TPM1-232ENST00000561425 GLIS2Q9BZE0 524 aaPredicted RBP25.94■■□□□ 1.74
TPM1-232ENST00000561425 A0A1B0GUL6 1792 aa25.94■■□□□ 1.74
TPM1-232ENST00000561425 ZNF646O15015 1829 aaPredicted RBP25.93■■□□□ 1.74
TPM1-232ENST00000561425 IPO8O15397 1037 aaKnown RBP25.93■■□□□ 1.74
TPM1-232ENST00000561425 TTLL5Q6EMB2 1281 aa25.93■■□□□ 1.74
TPM1-232ENST00000561425 LRRC24Q50LG9 513 aa25.92■■□□□ 1.74
TPM1-232ENST00000561425 RBM26Q5T8P6 1007 aaKnown RBP25.92■■□□□ 1.74
TPM1-232ENST00000561425 VGLL2Q8N8G2 317 aa25.92■■□□□ 1.74
TPM1-232ENST00000561425 MXD3Q9BW11 206 aa25.92■■□□□ 1.74
TPM1-232ENST00000561425 MKRN1Q9UHC7 482 aaKnown RBP25.92■■□□□ 1.74
TPM1-232ENST00000561425 UBTFL1P0CB47 393 aaPredicted RBP25.91■■□□□ 1.74
TPM1-232ENST00000561425 TRIM27P14373 513 aa25.91■■□□□ 1.74
TPM1-232ENST00000561425 ATF7IPQ6VMQ6 1270 aa25.91■■□□□ 1.74
TPM1-232ENST00000561425 MYOZ2Q9NPC6 264 aa25.91■■□□□ 1.74
TPM1-232ENST00000561425 PLIN1O60240 522 aa25.9■■□□□ 1.74
TPM1-232ENST00000561425 GTF2IP78347 998 aa25.9■■□□□ 1.74
TPM1-232ENST00000561425 PTPN12Q05209 780 aaKnown RBP25.9■■□□□ 1.74
TPM1-232ENST00000561425 ZNF804AQ7Z570 1209 aa25.9■■□□□ 1.74
TPM1-232ENST00000561425 KLHDC4Q8TBB5 520 aa25.9■■□□□ 1.74
TPM1-232ENST00000561425 HDAC5Q9UQL6 1122 aa25.9■■□□□ 1.74
TPM1-232ENST00000561425 FKBP1AP62942 108 aaKnown RBP25.89■■□□□ 1.74
TPM1-232ENST00000561425 USP48Q86UV5 1035 aa25.89■■□□□ 1.74
TPM1-232ENST00000561425 FAM84BQ96KN1 310 aaPredicted RBP25.89■■□□□ 1.74
TPM1-232ENST00000561425 MEIS3Q99687 375 aa25.89■■□□□ 1.74
TPM1-232ENST00000561425 PDE8BO95263 885 aa25.88■■□□□ 1.73
TPM1-232ENST00000561425 SCARF1Q14162 830 aa25.88■■□□□ 1.73
TPM1-232ENST00000561425 DEFB115Q30KQ5 88 aa25.88■■□□□ 1.73
TPM1-232ENST00000561425 TDRD7Q8NHU6 1098 aaKnown RBP25.88■■□□□ 1.73
TPM1-232ENST00000561425 TLL2Q9Y6L7 1015 aa25.88■■□□□ 1.73
TPM1-232ENST00000561425 ASTN2O75129 1339 aaPredicted RBP25.88■■□□□ 1.73
TPM1-232ENST00000561425 SASH1O94885 1247 aa25.87■■□□□ 1.73
TPM1-232ENST00000561425 VEGFBP49765 207 aa25.87■■□□□ 1.73
TPM1-232ENST00000561425 CERS5Q8N5B7 392 aa25.87■■□□□ 1.73
TPM1-232ENST00000561425 DCPSQ96C86 337 aaKnown RBP25.87■■□□□ 1.73
TPM1-232ENST00000561425 FBXO3Q9UK99 471 aa25.87■■□□□ 1.73
TPM1-232ENST00000561425 TNNQ9UQP3 1299 aa25.87■■□□□ 1.73
TPM1-232ENST00000561425 EYA2O00167 538 aa25.86■■□□□ 1.73
TPM1-232ENST00000561425 CELF2O95319 508 aaKnown RBP25.86■■□□□ 1.73
TPM1-232ENST00000561425 KRT26Q7Z3Y9 468 aa25.86■■□□□ 1.73
TPM1-232ENST00000561425 FBXO33Q7Z6M2 555 aa25.86■■□□□ 1.73
TPM1-232ENST00000561425 ZBED3Q96IU2 234 aaPredicted RBP25.86■■□□□ 1.73
TPM1-232ENST00000561425 LRRFIP2Q9Y608 721 aaKnown RBP25.86■■□□□ 1.73
TPM1-232ENST00000561425 FAM205AQ6ZU69 1335 aa25.86■■□□□ 1.73
TPM1-232ENST00000561425 PITPNM2Q9BZ72 1349 aa25.86■■□□□ 1.73
TPM1-232ENST00000561425 FGFR2P21802 821 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 HIBADHP31937 336 aaKnown RBP25.85■■□□□ 1.73
TPM1-232ENST00000561425 METTL24Q5JXM2 366 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 DLK2Q6UY11 383 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 ATG9AQ7Z3C6 839 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 SAPCD2Q86UD0 394 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 OGFOD1Q8N543 542 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 GGA3Q9NZ52 723 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 TRPM7Q96QT4 1865 aa25.85■■□□□ 1.73
TPM1-232ENST00000561425 GNAI3P08754 354 aa25.84■■□□□ 1.73
TPM1-232ENST00000561425 FBXW7Q969H0 707 aa25.84■■□□□ 1.73
TPM1-232ENST00000561425 HHIPL1Q96JK4 782 aa25.84■■□□□ 1.73
TPM1-232ENST00000561425 ABT1Q9ULW3 272 aaKnown RBP25.84■■□□□ 1.73
TPM1-232ENST00000561425 WNT10BO00744 389 aa25.83■■□□□ 1.73
TPM1-232ENST00000561425 CIAO1O76071 339 aa25.83■■□□□ 1.73
TPM1-232ENST00000561425 GYG1P46976 350 aa25.83■■□□□ 1.73
TPM1-232ENST00000561425 MTX1Q13505 466 aa25.83■■□□□ 1.73
TPM1-232ENST00000561425 ANGEL2Q5VTE6 544 aaKnown RBP25.83■■□□□ 1.73
TPM1-232ENST00000561425 ZKSCAN2Q63HK3 967 aa25.83■■□□□ 1.73
TPM1-232ENST00000561425 FRAT1Q92837 279 aaPredicted RBP25.83■■□□□ 1.73
TPM1-232ENST00000561425 ADM5C9JUS6 153 aa25.82■■□□□ 1.72
TPM1-232ENST00000561425 NBPF9Q3BBW0 867 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms