RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 J3QW42 95 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 PRRG2O14669 202 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 WISP1O95388 367 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 EGFRP00533 1210 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
AP4E1-204ENST00000561004 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 GALNT11Q8NCW6 608 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
AP4E1-204ENST00000561004 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
AP4E1-204ENST00000561004 TARBP1Q13395 1621 aaKnown RBP7.56□□□□□ -1.2
AP4E1-204ENST00000561004 NCANO14594 1321 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 EEA1Q15075 1411 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 PDS5BQ9NTI5 1447 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
AP4E1-204ENST00000561004 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 LINC01387J3KSC0 135 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 ATP9BO43861 1147 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 LILRA6Q6PI73 481 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 FLCNQ8NFG4 579 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 BHLHE22Q8NFJ8 381 aaPredicted RBP7.55□□□□□ -1.2
AP4E1-204ENST00000561004 POLA1P09884 1462 aaPredicted RBP7.55□□□□□ -1.2
AP4E1-204ENST00000561004 RAD54L2Q9Y4B4 1467 aa7.55□□□□□ -1.2
AP4E1-204ENST00000561004 THOC2Q8NI27 1593 aaKnown RBP7.54□□□□□ -1.2
AP4E1-204ENST00000561004 USP17L5A8MUK1 530 aa7.54□□□□□ -1.2
AP4E1-204ENST00000561004 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-204ENST00000561004 GAS2O43903 313 aaKnown RBP7.54□□□□□ -1.2
AP4E1-204ENST00000561004 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-204ENST00000561004 RNF208Q9H0X6 261 aa7.54□□□□□ -1.2
AP4E1-204ENST00000561004 ZNF777Q9ULD5 760 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-204ENST00000561004 TRIM33Q9UPN9 1127 aa7.54□□□□□ -1.2
AP4E1-204ENST00000561004 C21orf2O43822 256 aa7.53□□□□□ -1.2
AP4E1-204ENST00000561004 PAPLNO95428 1278 aa7.53□□□□□ -1.2
AP4E1-204ENST00000561004 GRNP28799 593 aaKnown RBP7.53□□□□□ -1.2
AP4E1-204ENST00000561004 FDX2Q6P4F2 183 aa7.53□□□□□ -1.2
AP4E1-204ENST00000561004 BCS1LQ9Y276 419 aa7.53□□□□□ -1.2
AP4E1-204ENST00000561004 PBRM1Q86U86 1689 aa7.53□□□□□ -1.2
AP4E1-204ENST00000561004 B8ZZF3 427 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 CYP26A1O43174 497 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 MAP4P27816 1152 aaKnown RBP7.52□□□□□ -1.21
AP4E1-204ENST00000561004 CDC27P30260 824 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 KRTAP5-3Q6L8H2 238 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 FBXL6Q8N531 539 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
AP4E1-204ENST00000561004 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 TFIP11Q9UBB9 837 aaKnown RBP7.52□□□□□ -1.21
AP4E1-204ENST00000561004 ABCA5Q8WWZ7 1642 aa7.52□□□□□ -1.21
AP4E1-204ENST00000561004 USP17L3A6NCW0 530 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 USP17L4A6NCW7 530 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 FSCN2O14926 492 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 SMNDC1O75940 238 aaKnown RBP eCLIP7.51□□□□□ -1.21
AP4E1-204ENST00000561004 F13BP05160 661 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 ZNF865P0CJ78 1059 aaPredicted RBP7.51□□□□□ -1.21
AP4E1-204ENST00000561004 USP17L2Q6R6M4 530 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 USP17L1Q7RTZ2 530 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 C14orf37Q86TY3 774 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
AP4E1-204ENST00000561004 SPACA7Q96KW9 195 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 TOX2Q96NM4 488 aa7.51□□□□□ -1.21
AP4E1-204ENST00000561004 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
AP4E1-204ENST00000561004 CUX2O14529 1486 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 MRC2Q9UBG0 1479 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 RAPGEF2Q9Y4G8 1499 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 XYLBO75191 536 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 MICAL2O94851 1124 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 ZSCAN18Q8TBC5 510 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-204ENST00000561004 TMEM40Q8WWA1 233 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 KCNK4Q9NYG8 393 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 MAFBQ9Y5Q3 323 aaPredicted RBP7.5□□□□□ -1.21
AP4E1-204ENST00000561004 WDR62O43379 1518 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 ABCA10Q8WWZ4 1543 aa7.5□□□□□ -1.21
AP4E1-204ENST00000561004 PRXQ9BXM0 1461 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 RXRBP28702 533 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 PREPP48147 710 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 SIX5Q8N196 739 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
AP4E1-204ENST00000561004 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 KIAA1024Q9UPX6 916 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 GOLGA3Q08378 1498 aa7.49□□□□□ -1.21
AP4E1-204ENST00000561004 ERICH3Q5RHP9 1530 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 CLDN10P78369 228 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 PAOXQ6QHF9 649 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 KIF27Q86VH2 1401 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 OGFOD1Q8N543 542 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 WNT8BQ93098 351 aa7.48□□□□□ -1.21
AP4E1-204ENST00000561004 RTCBQ9Y3I0 505 aaKnown RBP7.48□□□□□ -1.21
AP4E1-204ENST00000561004 CTTNBP2Q8WZ74 1663 aa7.47□□□□□ -1.21
AP4E1-204ENST00000561004 MMP20O60882 483 aa7.47□□□□□ -1.21
AP4E1-204ENST00000561004 ATG4DQ86TL0 474 aaPredicted RBP7.47□□□□□ -1.21
AP4E1-204ENST00000561004 FAM84AQ96KN4 292 aa7.47□□□□□ -1.21
AP4E1-204ENST00000561004 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
AP4E1-204ENST00000561004 RAPGEFL1Q9UHV5 662 aa7.47□□□□□ -1.21
AP4E1-204ENST00000561004 CUL7Q14999 1698 aa7.47□□□□□ -1.21
AP4E1-204ENST00000561004 TNIKQ9UKE5 1360 aa7.46□□□□□ -1.21
AP4E1-204ENST00000561004 CEP135Q66GS9 1140 aa7.46□□□□□ -1.22
AP4E1-204ENST00000561004 SIAH1Q8IUQ4 282 aa7.46□□□□□ -1.22
AP4E1-204ENST00000561004 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms