RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TSPYL1Q9H0U9 437 aa19.16■□□□□ 0.66
TPM1-228ENST00000560975 CCDC9Q9Y3X0 531 aaKnown RBP19.16■□□□□ 0.66
TPM1-228ENST00000560975 OTUD7BQ6GQQ9 843 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 TRIM65Q6PJ69 517 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 ILDR1Q86SU0 546 aaPredicted RBP19.15■□□□□ 0.66
TPM1-228ENST00000560975 TBC1D8O95759 1140 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 NLRP6P59044 892 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 SMC1AQ14683 1233 aaKnown RBP19.15■□□□□ 0.66
TPM1-228ENST00000560975 C10orf67Q8IYJ2 551 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 CCDC191Q8NCU4 936 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 TRIM66O15016 1216 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 FANCCQ00597 558 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 TEFQ10587 303 aa19.15■□□□□ 0.66
TPM1-228ENST00000560975 PHLPP2Q6ZVD8 1323 aa19.14■□□□□ 0.66
TPM1-228ENST00000560975 ALDH1L1O75891 902 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 STOX1Q6ZVD7 989 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 LCMT1Q9UIC8 334 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 NEO1Q92859 1461 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 LRRC37A3O60309 1634 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 PFKFB2O60825 505 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 ZSCAN26Q16670 478 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 CHST3Q7LGC8 479 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 BABAM1Q9NWV8 329 aa19.14■□□□□ 0.65
TPM1-228ENST00000560975 NRXN3Q9Y4C0 1643 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
TPM1-228ENST00000560975 AIMP1Q12904 312 aaKnown RBP19.13■□□□□ 0.65
TPM1-228ENST00000560975 STK38Q15208 465 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 USPL1Q5W0Q7 1092 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 KAZALD1Q96I82 304 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 HOXC9P31274 260 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 GPS2Q13227 327 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 CC2D1AQ6P1N0 951 aaPredicted RBP19.13■□□□□ 0.65
TPM1-228ENST00000560975 DPF2Q92785 391 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 RSPH14Q9UHP6 348 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 PARP3Q9Y6F1 533 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 FMN2Q9NZ56 1722 aa19.13■□□□□ 0.65
TPM1-228ENST00000560975 EFCAB8A8MWE9 144 aa19.12■□□□□ 0.65
TPM1-228ENST00000560975 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
TPM1-228ENST00000560975 LRRFIP1Q32MZ4 808 aaKnown RBP19.12■□□□□ 0.65
TPM1-228ENST00000560975 CLIC4Q9Y696 253 aa19.12■□□□□ 0.65
TPM1-228ENST00000560975 NCAPHQ15003 741 aa19.12■□□□□ 0.65
TPM1-228ENST00000560975 LMAN1P49257 510 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 CCDC158Q5M9N0 1113 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 SIRT1Q96EB6 747 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 LLPHQ9BRT6 129 aaKnown RBP19.11■□□□□ 0.65
TPM1-228ENST00000560975 ADALQ6DHV7 355 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 REXO1L1PQ8IX06 675 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
TPM1-228ENST00000560975 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 SERPINC1P01008 464 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 TUBB4AP04350 444 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 KCNJ6P48051 423 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 RASSF4Q9H2L5 321 aa19.11■□□□□ 0.65
TPM1-228ENST00000560975 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 GRM8O00222 908 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 CCP110O43303 1012 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 CFAP100Q494V2 611 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 MUM1L1Q5H9M0 696 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 SRRTQ9BXP5 876 aaKnown RBP19.1■□□□□ 0.65
TPM1-228ENST00000560975 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 UBASH3AP57075 661 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 NLRP12P59046 1061 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 GNG11P61952 73 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 KSR2Q6VAB6 950 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
TPM1-228ENST00000560975 UBXN6Q9BZV1 441 aa19.1■□□□□ 0.65
TPM1-228ENST00000560975 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
TPM1-228ENST00000560975 JCADQ9P266 1359 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 MYO1CO00159 1063 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 HSP90AA4PQ58FG1 418 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 WDR24Q96S15 920 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 ZSWIM4Q9H7M6 989 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 DHX32Q7L7V1 743 aaKnown RBP19.09■□□□□ 0.65
TPM1-228ENST00000560975 ARFGAP3Q9NP61 516 aa19.09■□□□□ 0.65
TPM1-228ENST00000560975 ZNF202O95125 648 aa19.08■□□□□ 0.65
TPM1-228ENST00000560975 TPM1P09493 284 aa19.08■□□□□ 0.65
TPM1-228ENST00000560975 MPRIPQ6WCQ1 1025 aa19.08■□□□□ 0.65
TPM1-228ENST00000560975 BPIFA3Q9BQP9 254 aa19.08■□□□□ 0.65
TPM1-228ENST00000560975 PARD6BQ9BYG5 372 aa19.08■□□□□ 0.65
TPM1-228ENST00000560975 VWA3AA6NCI4 1184 aa19.08■□□□□ 0.64
TPM1-228ENST00000560975 CASQ1P31415 396 aa19.08■□□□□ 0.64
TPM1-228ENST00000560975 PPP2R3AQ06190 1150 aa19.08■□□□□ 0.64
TPM1-228ENST00000560975 LINC00301Q8NCQ3 95 aa19.08■□□□□ 0.64
TPM1-228ENST00000560975 ZNF609O15014 1411 aa19.08■□□□□ 0.64
TPM1-228ENST00000560975 RICTORQ6R327 1708 aa19.08■□□□□ 0.64
TPM1-228ENST00000560975 ATL3Q6DD88 541 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 GJB4Q9NTQ9 266 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
TPM1-228ENST00000560975 NEDD4P46934 1319 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 TECPR2O15040 1411 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 ATP8B1O43520 1251 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 MCMDC2Q4G0Z9 681 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 PDILTQ8N807 584 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 ADAM21Q9UKJ8 722 aa19.07■□□□□ 0.64
TPM1-228ENST00000560975 PPP2R2CQ9Y2T4 447 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms