RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 FMNL2Q96PY5 1086 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 KCPQ6ZWJ8 1503 aa7.06□□□□□ -1.28
ZEB1-220ENST00000560909 KDM3BQ7LBC6 1761 aa7.05□□□□□ -1.28
ZEB1-220ENST00000560909 KRT24Q2M2I5 525 aa7.05□□□□□ -1.28
ZEB1-220ENST00000560909 TWISTNBQ3B726 338 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-220ENST00000560909 FAM182BQ5T319 152 aa7.05□□□□□ -1.28
ZEB1-220ENST00000560909 LRP10Q7Z4F1 713 aa7.05□□□□□ -1.28
ZEB1-220ENST00000560909 ACSBG1Q96GR2 724 aa7.05□□□□□ -1.28
ZEB1-220ENST00000560909 TEX13AQ9BXU3 409 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-220ENST00000560909 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
ZEB1-220ENST00000560909 PAPPAQ13219 1627 aa7.05□□□□□ -1.28
ZEB1-220ENST00000560909 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 UPP2O95045 317 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 SIK1P57059 783 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 TTC5Q8N0Z6 440 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 ZFAND3Q9H8U3 227 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 RCAN3Q9UKA8 241 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
ZEB1-220ENST00000560909 ZNF831Q5JPB2 1677 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 NHSQ6T4R5 1651 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 UBR2Q8IWV8 1755 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 CICQ96RK0 1608 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-220ENST00000560909 CENPBP07199 599 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-220ENST00000560909 CYP19A1P11511 503 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-220ENST00000560909 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-220ENST00000560909 ARTNQ5T4W7 220 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-220ENST00000560909 CCDC125Q86Z20 511 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 KCNV2Q8TDN2 545 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 SSH1Q8WYL5 1049 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 ARHGAP45Q92619 1136 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 DDX21Q9NR30 783 aaKnown RBP eCLIP7.03□□□□□ -1.28
ZEB1-220ENST00000560909 USP16Q9Y5T5 823 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 PALLDQ8WX93 1383 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 ITGB4P16144 1822 aa7.03□□□□□ -1.28
ZEB1-220ENST00000560909 SBF2Q86WG5 1849 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 PRAMEF22A3QJZ6 481 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 PTCD1O75127 700 aaKnown RBP7.02□□□□□ -1.29
ZEB1-220ENST00000560909 TRIM37O94972 964 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 ZIC2O95409 532 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-220ENST00000560909 YBX3P16989 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
ZEB1-220ENST00000560909 HMGB2P26583 209 aaKnown RBP7.02□□□□□ -1.29
ZEB1-220ENST00000560909 ITPK1Q13572 414 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 SLC27A3Q5K4L6 730 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 NBPF14Q5TI25 921 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 CCDC30Q5VVM6 783 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 NBPF10Q6P3W6 841 aaKnown RBP7.02□□□□□ -1.29
ZEB1-220ENST00000560909 DNAJC10Q8IXB1 793 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 NBPF15Q8N660 670 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-220ENST00000560909 KAT6BQ8WYB5 2073 aa7.02□□□□□ -1.29
ZEB1-220ENST00000560909 DOT1LQ8TEK3 1739 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 IBTKQ9P2D0 1353 aaPredicted RBP7.01□□□□□ -1.29
ZEB1-220ENST00000560909 ELL2O00472 640 aaPredicted RBP7.01□□□□□ -1.29
ZEB1-220ENST00000560909 BCAR3O75815 825 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 STARD3NLO95772 234 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 ITGA6P23229 1130 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 SH3BP2P78314 561 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 Q3C1V9 767 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 HDGFL1Q5TGJ6 251 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 INTS5Q6P9B9 1019 aaKnown RBP7.01□□□□□ -1.29
ZEB1-220ENST00000560909 CAMKK2Q96RR4 588 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 USB1Q9BQ65 265 aaKnown RBP7.01□□□□□ -1.29
ZEB1-220ENST00000560909 LRRC4BQ9NT99 713 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 DBF4Q9UBU7 674 aaPredicted RBP7.01□□□□□ -1.29
ZEB1-220ENST00000560909 VIRMAQ69YN4 1812 aaKnown RBP7.01□□□□□ -1.29
ZEB1-220ENST00000560909 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
ZEB1-220ENST00000560909 EIF5P55010 431 aaKnown RBP7□□□□□ -1.29
ZEB1-220ENST00000560909 HYPKQ9NX55 129 aa7□□□□□ -1.29
ZEB1-220ENST00000560909 PTPRCP08575 1304 aa7□□□□□ -1.29
ZEB1-220ENST00000560909 BTAF1O14981 1849 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 APBA3O96018 575 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 A1BGP04217 495 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 IL6STP40189 918 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-220ENST00000560909 PTGDRQ13258 359 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 TXNRD1Q16881 649 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 PROSER3Q2NL68 480 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 G2E3Q7L622 706 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 LINC00116Q8NCU8 138 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 STK31Q9BXU1 1019 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 SMC4Q9NTJ3 1288 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 CHPF2Q9P2E5 772 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 CCNL1Q9UK58 526 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-220ENST00000560909 KIF16BQ96L93 1317 aa6.99□□□□□ -1.29
ZEB1-220ENST00000560909 LY75O60449 1722 aa6.98□□□□□ -1.29
ZEB1-220ENST00000560909 RREB1Q92766 1687 aa6.98□□□□□ -1.29
ZEB1-220ENST00000560909 IPO8O15397 1037 aaKnown RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 RPS6KA4O75676 772 aa6.98□□□□□ -1.29
ZEB1-220ENST00000560909 EIF2S2P20042 333 aaKnown RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 CRKLP46109 303 aaKnown RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 RRP1P56182 461 aaKnown RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 FLIIQ13045 1269 aa6.98□□□□□ -1.29
ZEB1-220ENST00000560909 PTCRAQ6ISU1 281 aaPredicted RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 ATF7IPQ6VMQ6 1270 aa6.98□□□□□ -1.29
ZEB1-220ENST00000560909 CCDC87Q9NVE4 849 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms