RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 F6X3S4 739 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 CCER2I3L3R5 266 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 MAP2K2P36507 400 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
TPM1-223ENST00000560445 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 SLC4A10Q6U841 1118 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 ZNF408Q9H9D4 720 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 THSD7BQ9C0I4 1608 aa17.79■□□□□ 0.44
TPM1-223ENST00000560445 CA12O43570 354 aa17.78■□□□□ 0.44
TPM1-223ENST00000560445 CT47B1P0C2W7 299 aaPredicted RBP17.78■□□□□ 0.44
TPM1-223ENST00000560445 RBM26Q5T8P6 1007 aaKnown RBP17.78■□□□□ 0.44
TPM1-223ENST00000560445 CST9Q5W186 159 aa17.78■□□□□ 0.44
TPM1-223ENST00000560445 SAPCD2Q86UD0 394 aa17.78■□□□□ 0.44
TPM1-223ENST00000560445 C2orf69Q8N8R5 385 aa17.78■□□□□ 0.44
TPM1-223ENST00000560445 WBP1LQ9NX94 342 aa17.78■□□□□ 0.44
TPM1-223ENST00000560445 PITPNM2Q9BZ72 1349 aa17.77■□□□□ 0.44
TPM1-223ENST00000560445 CHRNDQ07001 517 aa17.77■□□□□ 0.44
TPM1-223ENST00000560445 USP48Q86UV5 1035 aa17.77■□□□□ 0.44
TPM1-223ENST00000560445 GGA3Q9NZ52 723 aa17.77■□□□□ 0.44
TPM1-223ENST00000560445 HDAC9Q9UKV0 1011 aa17.77■□□□□ 0.44
TPM1-223ENST00000560445 FOXO4P98177 505 aa17.76■□□□□ 0.43
TPM1-223ENST00000560445 COL13A1Q5TAT6 717 aaPredicted RBP17.76■□□□□ 0.43
TPM1-223ENST00000560445 LMBR1LQ6UX01 489 aa17.76■□□□□ 0.43
TPM1-223ENST00000560445 ZNF804AQ7Z570 1209 aa17.76■□□□□ 0.43
TPM1-223ENST00000560445 FBXW7Q969H0 707 aa17.76■□□□□ 0.43
TPM1-223ENST00000560445 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
TPM1-223ENST00000560445 KCNQ5Q9NR82 932 aa17.76■□□□□ 0.43
TPM1-223ENST00000560445 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 FKBP1BP68106 108 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 NOGQ13253 232 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 GRM1Q13255 1194 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 C15orf52Q6ZUT6 534 aaKnown RBP17.75■□□□□ 0.43
TPM1-223ENST00000560445 CNNM1Q9NRU3 951 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 HDAC5Q9UQL6 1122 aa17.75■□□□□ 0.43
TPM1-223ENST00000560445 FOXN1O15353 648 aa17.74■□□□□ 0.43
TPM1-223ENST00000560445 HUNKP57058 714 aa17.74■□□□□ 0.43
TPM1-223ENST00000560445 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
TPM1-223ENST00000560445 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
TPM1-223ENST00000560445 CYP4F22Q6NT55 531 aa17.74■□□□□ 0.43
TPM1-223ENST00000560445 GMLQ99445 158 aa17.74■□□□□ 0.43
TPM1-223ENST00000560445 GBA2Q9HCG7 927 aaPredicted RBP17.74■□□□□ 0.43
TPM1-223ENST00000560445 SCARF1Q14162 830 aa17.73■□□□□ 0.43
TPM1-223ENST00000560445 TTLL5Q6EMB2 1281 aa17.73■□□□□ 0.43
TPM1-223ENST00000560445 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
TPM1-223ENST00000560445 UTYO14607 1347 aa17.72■□□□□ 0.43
TPM1-223ENST00000560445 NF2P35240 595 aa17.72■□□□□ 0.43
TPM1-223ENST00000560445 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
TPM1-223ENST00000560445 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
TPM1-223ENST00000560445 ANGEL2Q5VTE6 544 aaKnown RBP17.72■□□□□ 0.43
TPM1-223ENST00000560445 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
TPM1-223ENST00000560445 EGFRP00533 1210 aa17.71■□□□□ 0.43
TPM1-223ENST00000560445 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
TPM1-223ENST00000560445 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
TPM1-223ENST00000560445 MROH5Q6ZUA9 1318 aa17.71■□□□□ 0.42
TPM1-223ENST00000560445 POLR2AP24928 1970 aaKnown RBP17.7■□□□□ 0.42
TPM1-223ENST00000560445 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
TPM1-223ENST00000560445 FKBP1AP62942 108 aaKnown RBP17.7■□□□□ 0.42
TPM1-223ENST00000560445 RGMBQ6NW40 437 aa17.7■□□□□ 0.42
TPM1-223ENST00000560445 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
TPM1-223ENST00000560445 CDCA5Q96FF9 252 aa17.7■□□□□ 0.42
TPM1-223ENST00000560445 CD209Q9NNX6 404 aa17.7■□□□□ 0.42
TPM1-223ENST00000560445 A0A1B0GUL6 1792 aa17.69■□□□□ 0.42
TPM1-223ENST00000560445 MYO1BO43795 1136 aa17.69■□□□□ 0.42
TPM1-223ENST00000560445 GTF2IP78347 998 aa17.69■□□□□ 0.42
TPM1-223ENST00000560445 UBE4AQ14139 1066 aa17.69■□□□□ 0.42
TPM1-223ENST00000560445 SSH1Q8WYL5 1049 aa17.69■□□□□ 0.42
TPM1-223ENST00000560445 COL1A1P02452 1464 aaPredicted RBP17.69■□□□□ 0.42
TPM1-223ENST00000560445 PAPPA2Q9BXP8 1791 aa17.68■□□□□ 0.42
TPM1-223ENST00000560445 IL1R1P14778 569 aa17.68■□□□□ 0.42
TPM1-223ENST00000560445 LBX1P52954 281 aa17.68■□□□□ 0.42
TPM1-223ENST00000560445 TXNRD3Q86VQ6 643 aa17.68■□□□□ 0.42
TPM1-223ENST00000560445 TAF5LO75529 589 aa17.67■□□□□ 0.42
TPM1-223ENST00000560445 HSPA8P11142 646 aaKnown RBP17.67■□□□□ 0.42
TPM1-223ENST00000560445 ZNF157P51786 506 aaPredicted RBP17.67■□□□□ 0.42
TPM1-223ENST00000560445 RABL6Q3YEC7 729 aaPredicted RBP17.67■□□□□ 0.42
TPM1-223ENST00000560445 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
TPM1-223ENST00000560445 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
TPM1-223ENST00000560445 API5Q9BZZ5 524 aaKnown RBP17.67■□□□□ 0.42
TPM1-223ENST00000560445 PLIN1O60240 522 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
TPM1-223ENST00000560445 DLGAP5Q15398 846 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 PPP2R3BQ9Y5P8 575 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
TPM1-223ENST00000560445 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
TPM1-223ENST00000560445 WNT10BO00744 389 aa17.65■□□□□ 0.42
TPM1-223ENST00000560445 AOC2O75106 756 aa17.65■□□□□ 0.42
TPM1-223ENST00000560445 SASH1O94885 1247 aa17.65■□□□□ 0.42
TPM1-223ENST00000560445 KLRK1P26718 216 aa17.65■□□□□ 0.42
TPM1-223ENST00000560445 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
TPM1-223ENST00000560445 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
TPM1-223ENST00000560445 WTIPA6NIX2 430 aaPredicted RBP17.64■□□□□ 0.41
TPM1-223ENST00000560445 HIBADHP31937 336 aaKnown RBP17.64■□□□□ 0.41
TPM1-223ENST00000560445 METTL24Q5JXM2 366 aa17.64■□□□□ 0.41
TPM1-223ENST00000560445 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms