RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 RALBP1Q15311 655 aa12.06□□□□□ -0.48
SMAD3-215ENST00000560424 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
SMAD3-215ENST00000560424 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
SMAD3-215ENST00000560424 XDHP47989 1333 aa12.06□□□□□ -0.48
SMAD3-215ENST00000560424 MYO3BQ8WXR4 1341 aa12.06□□□□□ -0.48
SMAD3-215ENST00000560424 PSME4Q14997 1843 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 WNT10BO00744 389 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-215ENST00000560424 SASH1O94885 1247 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 ZBTB48P10074 688 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-215ENST00000560424 ATP2B4P23634 1241 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 SP3Q02447 781 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 GMLQ99445 158 aa12.05□□□□□ -0.48
SMAD3-215ENST00000560424 H0YGN5 161 aa12.04□□□□□ -0.48
SMAD3-215ENST00000560424 MMP14P50281 582 aa12.04□□□□□ -0.48
SMAD3-215ENST00000560424 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
SMAD3-215ENST00000560424 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
SMAD3-215ENST00000560424 BABAM1Q9NWV8 329 aa12.04□□□□□ -0.48
SMAD3-215ENST00000560424 BRCA2P51587 3418 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMAD3-215ENST00000560424 CRHR2Q13324 411 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 LDLRAD1Q5T700 205 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 WNK4Q96J92 1243 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 ZNF333Q96JL9 665 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 ISCA1Q9BUE6 129 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 CENPFP49454 3210 aa12.03□□□□□ -0.48
SMAD3-215ENST00000560424 MYCP01106 439 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-215ENST00000560424 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.49
SMAD3-215ENST00000560424 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.49
SMAD3-215ENST00000560424 DPF3Q92784 378 aa12.02□□□□□ -0.49
SMAD3-215ENST00000560424 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-215ENST00000560424 COL4A1P02462 1669 aa12.02□□□□□ -0.49
SMAD3-215ENST00000560424 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-215ENST00000560424 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-215ENST00000560424 IREB2P48200 963 aaKnown RBP12.01□□□□□ -0.49
SMAD3-215ENST00000560424 RIPK4P57078 832 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 STRIP1Q5VSL9 837 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-215ENST00000560424 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 DEFB129Q9H1M3 183 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-215ENST00000560424 FZD1Q9UP38 647 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 MED23Q9ULK4 1368 aa12.01□□□□□ -0.49
SMAD3-215ENST00000560424 TRIOBPQ9H2D6 2365 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 MYO1BO43795 1136 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 GOLGA2Q08379 1002 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 SUPT20HL1Q3ZLR7 823 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 DACT2Q5SW24 774 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 RIC3Q7Z5B4 369 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 KIAA0825Q8IV33 1275 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 CDC5LQ99459 802 aaKnown RBP12□□□□□ -0.49
SMAD3-215ENST00000560424 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
SMAD3-215ENST00000560424 PTCH2Q9Y6C5 1203 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
SMAD3-215ENST00000560424 HTTP42858 3142 aa12□□□□□ -0.49
SMAD3-215ENST00000560424 UNCXA6NJT0 531 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 PDE8AO60658 829 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 KIF22Q14807 665 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 DLGAP5Q15398 846 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 TTLL5Q6EMB2 1281 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
SMAD3-215ENST00000560424 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 SZT2Q5T011 3432 aa11.99□□□□□ -0.49
SMAD3-215ENST00000560424 TRIM28Q13263 835 aaKnown RBP11.98□□□□□ -0.49
SMAD3-215ENST00000560424 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-215ENST00000560424 ANKRD13AQ8IZ07 590 aa11.98□□□□□ -0.49
SMAD3-215ENST00000560424 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
SMAD3-215ENST00000560424 CCT4P50991 539 aaKnown RBP11.97□□□□□ -0.49
SMAD3-215ENST00000560424 MYD88Q99836 296 aa11.97□□□□□ -0.49
SMAD3-215ENST00000560424 PCCAP05165 728 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-215ENST00000560424 HOXB7P09629 217 aa11.96□□□□□ -0.49
SMAD3-215ENST00000560424 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
SMAD3-215ENST00000560424 SH3TC2Q8TF17 1288 aa11.96□□□□□ -0.49
SMAD3-215ENST00000560424 VEZTQ9HBM0 779 aa11.96□□□□□ -0.49
SMAD3-215ENST00000560424 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.49
SMAD3-215ENST00000560424 CEP290O15078 2479 aa11.96□□□□□ -0.5
SMAD3-215ENST00000560424 LAMB1P07942 1786 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 KCNJ4P48050 445 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 GTF2IP78347 998 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 CCDC191Q8NCU4 936 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 NKX2-3Q8TAU0 364 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 OPTNQ96CV9 577 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 ELP3Q9H9T3 547 aa11.95□□□□□ -0.5
SMAD3-215ENST00000560424 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-215ENST00000560424 CWC25Q9NXE8 425 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-215ENST00000560424 ZNF804BA4D1E1 1349 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 CLRN2A0PK11 232 aa11.94□□□□□ -0.5
SMAD3-215ENST00000560424 WTIPA6NIX2 430 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms