RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 KCNG4Q8TDN1 519 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 WDR62O43379 1518 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 MYO5CQ9NQX4 1742 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 ZNF165P49910 485 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 PRPF4BQ13523 1007 aaKnown RBP15.38■□□□□ 0.05
TRAF3-208ENST00000560371 TBC1D5Q92609 795 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 URI1O94763 535 aaPredicted RBP15.37■□□□□ 0.05
TRAF3-208ENST00000560371 ATP10AO60312 1499 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
TRAF3-208ENST00000560371 ESYT1Q9BSJ8 1104 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 AFMP43652 599 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 ALS2CR12Q96Q35 445 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 COMMD10Q9Y6G5 202 aa15.37■□□□□ 0.05
TRAF3-208ENST00000560371 ESPNB1AK53 854 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 MCM3P25205 808 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 IFFO1Q0D2I5 559 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 H0YIN7 160 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 GNA11P29992 359 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 GSDMDP57764 484 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 PICK1Q9NRD5 415 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 N4BP3O15049 544 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 KRT13P13646 458 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 RBM10P98175 930 aaKnown RBP15.36■□□□□ 0.05
TRAF3-208ENST00000560371 RAB3GAP1Q15042 981 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 TTC6Q86TZ1 520 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 SOS1Q07889 1333 aaPredicted RBP15.36■□□□□ 0.05
TRAF3-208ENST00000560371 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
TRAF3-208ENST00000560371 RTL9Q8NET4 1388 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 CAVIN2O95810 425 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 TFCP2Q12800 502 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 SLAIN2Q9P270 581 aa15.36■□□□□ 0.05
TRAF3-208ENST00000560371 IMPG2Q9BZV3 1241 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
TRAF3-208ENST00000560371 DENND2AQ9ULE3 1009 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 ACTN2P35609 894 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 TMX3Q96JJ7 454 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 USP21Q9UK80 565 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 UFL1O94874 794 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 TMC6Q7Z403 805 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 VAMP4O75379 141 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 NAA15Q9BXJ9 866 aaKnown RBP15.35■□□□□ 0.05
TRAF3-208ENST00000560371 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
TRAF3-208ENST00000560371 CHST3Q7LGC8 479 aa15.35■□□□□ 0.05
TRAF3-208ENST00000560371 KIF1BO60333 1816 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 RNF113AO15541 343 aaKnown RBP15.34■□□□□ 0.05
TRAF3-208ENST00000560371 PRIM1P49642 420 aaKnown RBP15.34■□□□□ 0.05
TRAF3-208ENST00000560371 SPECC1Q5M775 1068 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 SPAG5Q96R06 1193 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 KRT24Q2M2I5 525 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 TEX11Q8IYF3 940 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 PSMD1Q99460 953 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 ATP7AQ04656 1500 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 TTC16Q8NEE8 873 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 ARHGEF10O15013 1369 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 NMIQ13287 307 aaPredicted RBP15.34■□□□□ 0.05
TRAF3-208ENST00000560371 SH2D4AQ9H788 454 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 UQCRHLA0A096LP55 91 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 UQCRHP07919 91 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 HLTFQ14527 1009 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAF3-208ENST00000560371 TRIM75PA6NK02 468 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 PLVAPQ9BX97 442 aa15.34■□□□□ 0.05
TRAF3-208ENST00000560371 ZSCAN22P10073 491 aaPredicted RBP15.33■□□□□ 0.05
TRAF3-208ENST00000560371 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
TRAF3-208ENST00000560371 PLCD3Q8N3E9 789 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 USP25Q9UHP3 1055 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 EIF6P56537 245 aaKnown RBP15.33■□□□□ 0.04
TRAF3-208ENST00000560371 IFI16Q16666 785 aaKnown RBP15.33■□□□□ 0.04
TRAF3-208ENST00000560371 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 PSMA7O14818 248 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 MAP2K1Q02750 393 aaPredicted RBP15.33■□□□□ 0.04
TRAF3-208ENST00000560371 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 TBC1D32Q96NH3 1257 aa15.33■□□□□ 0.04
TRAF3-208ENST00000560371 ITGA6P23229 1130 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 ASIC1P78348 528 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 MARCKSP29966 332 aaPredicted RBP15.32■□□□□ 0.04
TRAF3-208ENST00000560371 TMCO3Q6UWJ1 677 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 NEMFO60524 1076 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
TRAF3-208ENST00000560371 ZNF408Q9H9D4 720 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 PTPRKQ15262 1439 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
TRAF3-208ENST00000560371 ZSCAN30Q86W11 494 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 BACH1O14867 736 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 KRT79Q5XKE5 535 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 PDE8AO60658 829 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
TRAF3-208ENST00000560371 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
TRAF3-208ENST00000560371 AKR1B10O60218 316 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 KRT2P35908 639 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms