RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
ZEB1-218ENST00000560196 NDUFB9Q9Y6M9 179 aa17.44■□□□□ 0.38
ZEB1-218ENST00000560196 RNF113AO15541 343 aaKnown RBP17.43■□□□□ 0.38
ZEB1-218ENST00000560196 ZAP70P43403 619 aa17.43■□□□□ 0.38
ZEB1-218ENST00000560196 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
ZEB1-218ENST00000560196 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
ZEB1-218ENST00000560196 MAP4K1Q92918 833 aa17.43■□□□□ 0.38
ZEB1-218ENST00000560196 QSER1Q2KHR3 1735 aa17.43■□□□□ 0.38
ZEB1-218ENST00000560196 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
ZEB1-218ENST00000560196 AKAP11Q9UKA4 1901 aa17.43■□□□□ 0.38
ZEB1-218ENST00000560196 HOXA10P31260 410 aaPredicted RBP17.42■□□□□ 0.38
ZEB1-218ENST00000560196 PTH1RQ03431 593 aa17.42■□□□□ 0.38
ZEB1-218ENST00000560196 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
ZEB1-218ENST00000560196 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
ZEB1-218ENST00000560196 BAG6P46379 1132 aa17.41■□□□□ 0.38
ZEB1-218ENST00000560196 SLC4A3P48751 1232 aa17.41■□□□□ 0.38
ZEB1-218ENST00000560196 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
ZEB1-218ENST00000560196 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
ZEB1-218ENST00000560196 SLC15A2Q16348 729 aa17.41■□□□□ 0.38
ZEB1-218ENST00000560196 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
ZEB1-218ENST00000560196 ERICH6Q7L0X2 663 aa17.41■□□□□ 0.38
ZEB1-218ENST00000560196 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
ZEB1-218ENST00000560196 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
ZEB1-218ENST00000560196 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
ZEB1-218ENST00000560196 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
ZEB1-218ENST00000560196 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
ZEB1-218ENST00000560196 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
ZEB1-218ENST00000560196 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
ZEB1-218ENST00000560196 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.4■□□□□ 0.38
ZEB1-218ENST00000560196 HMG20BQ9P0W2 317 aa17.4■□□□□ 0.38
ZEB1-218ENST00000560196 PALD1Q9ULE6 856 aa17.4■□□□□ 0.38
ZEB1-218ENST00000560196 TAF1P21675 1872 aa17.39■□□□□ 0.38
ZEB1-218ENST00000560196 SNAP23O00161 211 aa17.39■□□□□ 0.37
ZEB1-218ENST00000560196 ST18O60284 1047 aa17.39■□□□□ 0.37
ZEB1-218ENST00000560196 BBOX1O75936 387 aa17.39■□□□□ 0.37
ZEB1-218ENST00000560196 CYP2E1P05181 493 aaPredicted RBP17.39■□□□□ 0.37
ZEB1-218ENST00000560196 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
ZEB1-218ENST00000560196 ZNF589Q86UQ0 364 aaPredicted RBP17.39■□□□□ 0.37
ZEB1-218ENST00000560196 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
ZEB1-218ENST00000560196 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
ZEB1-218ENST00000560196 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
ZEB1-218ENST00000560196 K7ELQ4 463 aaPredicted RBP17.38■□□□□ 0.37
ZEB1-218ENST00000560196 SEMA3EO15041 775 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 PI16Q6UXB8 463 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 FBXO33Q7Z6M2 555 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 APPBP2Q92624 585 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 DSCC1Q9BVC3 393 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 TM6SF1Q9BZW5 370 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
ZEB1-218ENST00000560196 LEMD3Q9Y2U8 911 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 SNX14Q9Y5W7 946 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 PARP3Q9Y6F1 533 aa17.38■□□□□ 0.37
ZEB1-218ENST00000560196 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
ZEB1-218ENST00000560196 MCM2P49736 904 aa17.37■□□□□ 0.37
ZEB1-218ENST00000560196 BCAMP50895 628 aa17.37■□□□□ 0.37
ZEB1-218ENST00000560196 UBE3CQ15386 1083 aa17.37■□□□□ 0.37
ZEB1-218ENST00000560196 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
ZEB1-218ENST00000560196 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
ZEB1-218ENST00000560196 C15orf52Q6ZUT6 534 aaKnown RBP17.37■□□□□ 0.37
ZEB1-218ENST00000560196 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
ZEB1-218ENST00000560196 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
ZEB1-218ENST00000560196 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
ZEB1-218ENST00000560196 MMP10P09238 476 aa17.36■□□□□ 0.37
ZEB1-218ENST00000560196 ADD2P35612 726 aa17.36■□□□□ 0.37
ZEB1-218ENST00000560196 RNF20Q5VTR2 975 aa17.36■□□□□ 0.37
ZEB1-218ENST00000560196 CCDC125Q86Z20 511 aa17.36■□□□□ 0.37
ZEB1-218ENST00000560196 FAM84BQ96KN1 310 aaPredicted RBP17.36■□□□□ 0.37
ZEB1-218ENST00000560196 MAST3O60307 1309 aa17.36■□□□□ 0.37
ZEB1-218ENST00000560196 IRS2Q9Y4H2 1338 aa17.36■□□□□ 0.37
ZEB1-218ENST00000560196 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
ZEB1-218ENST00000560196 KCNJ4P48050 445 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 CREB3L3Q68CJ9 461 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
ZEB1-218ENST00000560196 RASEFQ8IZ41 740 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 OSBP2Q969R2 916 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
ZEB1-218ENST00000560196 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 XDHP47989 1333 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 MYH7P12883 1935 aa17.35■□□□□ 0.37
ZEB1-218ENST00000560196 SLC27A2O14975 620 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 IGSF3O75054 1194 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 CHGBP05060 677 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 PDE6BP35913 854 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 NEK4P51957 841 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 ANKRD31Q8N7Z5 1873 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 DOCK2Q92608 1830 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 EP400Q96L91 3159 aa17.34■□□□□ 0.37
ZEB1-218ENST00000560196 M0R2C6 588 aa17.33■□□□□ 0.36
ZEB1-218ENST00000560196 NPR1P16066 1061 aa17.33■□□□□ 0.36
ZEB1-218ENST00000560196 PDE6AP16499 860 aa17.33■□□□□ 0.36
ZEB1-218ENST00000560196 GYG1P46976 350 aa17.33■□□□□ 0.36
ZEB1-218ENST00000560196 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
ZEB1-218ENST00000560196 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
ZEB1-218ENST00000560196 RPAP1Q9BWH6 1393 aaPredicted RBP17.32■□□□□ 0.36
ZEB1-218ENST00000560196 TCRBV5S4A2TA0A5A2 114 aa17.32■□□□□ 0.36
ZEB1-218ENST00000560196 SRGNP10124 158 aa17.32■□□□□ 0.36
ZEB1-218ENST00000560196 ATP2B4P23634 1241 aa17.32■□□□□ 0.36
ZEB1-218ENST00000560196 HIBADHP31937 336 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms