RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-212ENST00000560179 SMNDC1O75940 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
ETFA-212ENST00000560179 DGKGP49619 791 aa12.43□□□□□ -0.42
ETFA-212ENST00000560179 FGD1P98174 961 aa12.43□□□□□ -0.42
ETFA-212ENST00000560179 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.43□□□□□ -0.42
ETFA-212ENST00000560179 TMEM102Q8N9M5 508 aaPredicted RBP12.43□□□□□ -0.42
ETFA-212ENST00000560179 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
ETFA-212ENST00000560179 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
ETFA-212ENST00000560179 GADD45BO75293 160 aaPredicted RBP12.42□□□□□ -0.42
ETFA-212ENST00000560179 AFF1P51825 1210 aaKnown RBP12.42□□□□□ -0.42
ETFA-212ENST00000560179 HHIPQ96QV1 700 aa12.42□□□□□ -0.42
ETFA-212ENST00000560179 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
ETFA-212ENST00000560179 SNRPNP63162 240 aaKnown RBP12.41□□□□□ -0.42
ETFA-212ENST00000560179 FOXD4L4Q8WXT5 416 aaPredicted RBP12.41□□□□□ -0.42
ETFA-212ENST00000560179 NXPE3Q969Y0 559 aa12.41□□□□□ -0.42
ETFA-212ENST00000560179 EHD4Q9H223 541 aa12.41□□□□□ -0.42
ETFA-212ENST00000560179 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
ETFA-212ENST00000560179 TRIM33Q9UPN9 1127 aa12.41□□□□□ -0.42
ETFA-212ENST00000560179 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
ETFA-212ENST00000560179 GIPC2Q8TF65 315 aa12.4□□□□□ -0.42
ETFA-212ENST00000560179 DUSP9Q99956 384 aaKnown RBP12.4□□□□□ -0.42
ETFA-212ENST00000560179 SUV39H2Q9H5I1 410 aa12.4□□□□□ -0.42
ETFA-212ENST00000560179 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
ETFA-212ENST00000560179 RNF19AQ9NV58 838 aa12.4□□□□□ -0.42
ETFA-212ENST00000560179 GDF6Q6KF10 455 aaPredicted RBP12.39□□□□□ -0.43
ETFA-212ENST00000560179 ADAMTSL4Q6UY14 1074 aa12.39□□□□□ -0.43
ETFA-212ENST00000560179 LINC00114Q6XXX2 140 aa12.39□□□□□ -0.43
ETFA-212ENST00000560179 TCF12Q99081 682 aa12.39□□□□□ -0.43
ETFA-212ENST00000560179 GRM2Q14416 872 aa12.38□□□□□ -0.43
ETFA-212ENST00000560179 ZNF326Q5BKZ1 582 aaKnown RBP12.38□□□□□ -0.43
ETFA-212ENST00000560179 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
ETFA-212ENST00000560179 BHLHE41Q9C0J9 482 aaPredicted RBP12.38□□□□□ -0.43
ETFA-212ENST00000560179 LACRTQ9GZZ8 138 aa12.37□□□□□ -0.43
ETFA-212ENST00000560179 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
ETFA-212ENST00000560179 RBM47A0AV96 593 aaKnown RBP12.36□□□□□ -0.43
ETFA-212ENST00000560179 NID1P14543 1247 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 CACTIN-AS1Q8N1I8 211 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 GLIS3Q8NEA6 775 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 FRMD6Q96NE9 622 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 BCO2Q9BYV7 579 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 ADAM19Q9H013 955 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
ETFA-212ENST00000560179 ZNF16P17020 682 aaPredicted RBP12.35□□□□□ -0.43
ETFA-212ENST00000560179 PTPRAP18433 802 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 GNA15P30679 374 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 NXPE4Q6UWF7 544 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 IL22RA1Q8N6P7 574 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 OSBPL7Q9BZF2 842 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 MKL2Q9ULH7 1088 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 TRAK1Q9UPV9 953 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
ETFA-212ENST00000560179 METTL12A8MUP2 240 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 GIPC1O14908 333 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 BAG6P46379 1132 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 GRIA4P48058 902 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
ETFA-212ENST00000560179 ASAP3Q8TDY4 903 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
ETFA-212ENST00000560179 CDC27P30260 824 aa12.33□□□□□ -0.44
ETFA-212ENST00000560179 DAB2P98082 770 aa12.33□□□□□ -0.44
ETFA-212ENST00000560179 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
ETFA-212ENST00000560179 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
ETFA-212ENST00000560179 BEND7Q8N7W2 519 aaPredicted RBP12.33□□□□□ -0.44
ETFA-212ENST00000560179 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
ETFA-212ENST00000560179 A0A096LPE4 126 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 FAM181BA6NEQ2 426 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 SPRED3Q2MJR0 410 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 BSNDQ8WZ55 320 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 ABCB6Q9NP58 842 aa12.32□□□□□ -0.44
ETFA-212ENST00000560179 TMEM238LA0A1B0GVL6 79 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 GNB5O14775 395 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 PODNQ7Z5L7 613 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
ETFA-212ENST00000560179 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 C12orf49Q9H741 205 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 SOX13Q9UN79 622 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 AK5Q9Y6K8 562 aa12.31□□□□□ -0.44
ETFA-212ENST00000560179 PSMD2Q13200 908 aa12.3□□□□□ -0.44
ETFA-212ENST00000560179 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
ETFA-212ENST00000560179 SRCIN1Q9C0H9 1055 aa12.3□□□□□ -0.44
ETFA-212ENST00000560179 MUC3BQ9H195 1237 aa12.3□□□□□ -0.44
ETFA-212ENST00000560179 PPME1Q9Y570 386 aa12.3□□□□□ -0.44
ETFA-212ENST00000560179 FAM177BA6PVY3 158 aa12.29□□□□□ -0.44
ETFA-212ENST00000560179 PIK3R2O00459 728 aa12.29□□□□□ -0.44
ETFA-212ENST00000560179 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
ETFA-212ENST00000560179 SCARF2Q96GP6 870 aaPredicted RBP12.29□□□□□ -0.44
ETFA-212ENST00000560179 EPHA1P21709 976 aa12.28□□□□□ -0.44
ETFA-212ENST00000560179 EIF4BP23588 611 aaKnown RBP12.28□□□□□ -0.44
ETFA-212ENST00000560179 ITPKAP23677 461 aa12.28□□□□□ -0.44
ETFA-212ENST00000560179 FCGRTP55899 365 aa12.28□□□□□ -0.44
ETFA-212ENST00000560179 VN1R5Q7Z5H4 357 aa12.28□□□□□ -0.44
ETFA-212ENST00000560179 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
ETFA-212ENST00000560179 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.45
ETFA-212ENST00000560179 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
ETFA-212ENST00000560179 CDC25BP30305 580 aa12.26□□□□□ -0.45
ETFA-212ENST00000560179 CABP4P57796 275 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms