RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 KIAA1211Q6ZU35 1233 aa9.09□□□□□ -0.95
CRNDE-208ENST00000560029 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
CRNDE-208ENST00000560029 MUC3BQ9H195 1237 aa9.09□□□□□ -0.95
CRNDE-208ENST00000560029 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
CRNDE-208ENST00000560029 TM4SF5O14894 197 aa9.08□□□□□ -0.96
CRNDE-208ENST00000560029 CDC27P30260 824 aa9.08□□□□□ -0.96
CRNDE-208ENST00000560029 SWI5Q1ZZU3 235 aa9.08□□□□□ -0.96
CRNDE-208ENST00000560029 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
CRNDE-208ENST00000560029 OR13H1Q8NG92 308 aa9.08□□□□□ -0.96
CRNDE-208ENST00000560029 CLP1Q92989 425 aaKnown RBP9.08□□□□□ -0.96
CRNDE-208ENST00000560029 SH2B1Q9NRF2 756 aaPredicted RBP9.08□□□□□ -0.96
CRNDE-208ENST00000560029 RNF114Q9Y508 228 aa9.08□□□□□ -0.96
CRNDE-208ENST00000560029 HYAL2Q12891 473 aa9.07□□□□□ -0.96
CRNDE-208ENST00000560029 DUOXA2Q1HG44 320 aa9.07□□□□□ -0.96
CRNDE-208ENST00000560029 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
CRNDE-208ENST00000560029 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
CRNDE-208ENST00000560029 PRR19A6NJB7 356 aa9.06□□□□□ -0.96
CRNDE-208ENST00000560029 FSCN2O14926 492 aa9.06□□□□□ -0.96
CRNDE-208ENST00000560029 BRD2P25440 801 aaKnown RBP9.06□□□□□ -0.96
CRNDE-208ENST00000560029 SCNN1AP37088 669 aa9.06□□□□□ -0.96
CRNDE-208ENST00000560029 FAM46AQ96IP4 442 aaKnown RBP9.06□□□□□ -0.96
CRNDE-208ENST00000560029 SPACA7Q96KW9 195 aa9.06□□□□□ -0.96
CRNDE-208ENST00000560029 ADAM11O75078 769 aa9.05□□□□□ -0.96
CRNDE-208ENST00000560029 SMNDC1O75940 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
CRNDE-208ENST00000560029 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
CRNDE-208ENST00000560029 YBX3P16989 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
CRNDE-208ENST00000560029 SPINK2P20155 84 aa9.05□□□□□ -0.96
CRNDE-208ENST00000560029 NAA30Q147X3 362 aaPredicted RBP9.05□□□□□ -0.96
CRNDE-208ENST00000560029 RNF43Q68DV7 783 aa9.05□□□□□ -0.96
CRNDE-208ENST00000560029 CACTIN-AS1Q8N1I8 211 aa9.05□□□□□ -0.96
CRNDE-208ENST00000560029 FOXD4L4Q8WXT5 416 aaPredicted RBP9.05□□□□□ -0.96
CRNDE-208ENST00000560029 MKNK1Q9BUB5 465 aa9.05□□□□□ -0.96
CRNDE-208ENST00000560029 EPHA1P21709 976 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 ATP2B4P23634 1241 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 GRIK1P39086 918 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
CRNDE-208ENST00000560029 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 AEBP1Q8IUX7 1158 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 PIK3R5Q8WYR1 880 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 KLHDC7BQ96G42 594 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 MYRFLQ96LU7 910 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
CRNDE-208ENST00000560029 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
CRNDE-208ENST00000560029 SSFA2P28290 1259 aa9.03□□□□□ -0.96
CRNDE-208ENST00000560029 OCLNQ16625 522 aa9.03□□□□□ -0.96
CRNDE-208ENST00000560029 SHKBP1Q8TBC3 707 aa9.03□□□□□ -0.96
CRNDE-208ENST00000560029 GPR152Q8TDT2 470 aa9.03□□□□□ -0.96
CRNDE-208ENST00000560029 DBNDD2Q9BQY9 259 aa9.03□□□□□ -0.96
CRNDE-208ENST00000560029 BMP3P12645 472 aa9.02□□□□□ -0.97
CRNDE-208ENST00000560029 PHLDB3Q6NSJ2 640 aa9.02□□□□□ -0.97
CRNDE-208ENST00000560029 INTS5Q6P9B9 1019 aaKnown RBP9.02□□□□□ -0.97
CRNDE-208ENST00000560029 DTX1Q86Y01 620 aa9.02□□□□□ -0.97
CRNDE-208ENST00000560029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.02□□□□□ -0.97
CRNDE-208ENST00000560029 ZBTB39O15060 712 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 BRD1O95696 1058 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 HOXA10P31260 410 aaPredicted RBP9.01□□□□□ -0.97
CRNDE-208ENST00000560029 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 FAM117BQ6P1L5 589 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 BEND4Q6ZU67 534 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 FAM20CQ8IXL6 584 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 POP1Q99575 1024 aaKnown RBP9.01□□□□□ -0.97
CRNDE-208ENST00000560029 PBX4Q9BYU1 374 aa9.01□□□□□ -0.97
CRNDE-208ENST00000560029 CXXC1Q9P0U4 656 aaPredicted RBP9.01□□□□□ -0.97
CRNDE-208ENST00000560029 SART1O43290 800 aaKnown RBP9□□□□□ -0.97
CRNDE-208ENST00000560029 WNT11O96014 354 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 ZAP70P43403 619 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 NCAPG2Q86XI2 1143 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 CLEC10AQ8IUN9 316 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 KLHL23Q8NBE8 558 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 FAM83CQ9BQN1 747 aa9□□□□□ -0.97
CRNDE-208ENST00000560029 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
CRNDE-208ENST00000560029 PREPP48147 710 aa8.99□□□□□ -0.97
CRNDE-208ENST00000560029 NLRP12P59046 1061 aa8.99□□□□□ -0.97
CRNDE-208ENST00000560029 CEP120Q8N960 986 aa8.99□□□□□ -0.97
CRNDE-208ENST00000560029 SEC31BQ9NQW1 1179 aa8.99□□□□□ -0.97
CRNDE-208ENST00000560029 ACPPP15309 386 aa8.98□□□□□ -0.97
CRNDE-208ENST00000560029 MFSD14AQ96MC6 490 aa8.98□□□□□ -0.97
CRNDE-208ENST00000560029 ABI2Q9NYB9 513 aaPredicted RBP8.98□□□□□ -0.97
CRNDE-208ENST00000560029 KANSL3Q9P2N6 904 aa8.98□□□□□ -0.97
CRNDE-208ENST00000560029 TRPA1O75762 1119 aa8.97□□□□□ -0.97
CRNDE-208ENST00000560029 KIF4AO95239 1232 aa8.97□□□□□ -0.97
CRNDE-208ENST00000560029 PTPRAP18433 802 aa8.97□□□□□ -0.97
CRNDE-208ENST00000560029 FNDC3AQ9Y2H6 1198 aaKnown RBP8.97□□□□□ -0.97
CRNDE-208ENST00000560029 TRIM26Q12899 539 aaPredicted RBP8.96□□□□□ -0.98
CRNDE-208ENST00000560029 HGSNATQ68CP4 663 aa8.96□□□□□ -0.98
CRNDE-208ENST00000560029 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.96□□□□□ -0.98
CRNDE-208ENST00000560029 SLC7A3Q8WY07 619 aa8.96□□□□□ -0.98
CRNDE-208ENST00000560029 FAM13BQ9NYF5 915 aa8.96□□□□□ -0.98
CRNDE-208ENST00000560029 TMEM63CQ9P1W3 806 aa8.96□□□□□ -0.98
CRNDE-208ENST00000560029 ADGRE2Q9UHX3 823 aa8.96□□□□□ -0.98
CRNDE-208ENST00000560029 KCNA1Q09470 495 aa8.95□□□□□ -0.98
CRNDE-208ENST00000560029 FBXL6Q8N531 539 aa8.95□□□□□ -0.98
CRNDE-208ENST00000560029 ADAM19Q9H013 955 aa8.95□□□□□ -0.98
CRNDE-208ENST00000560029 CNTN3Q9P232 1028 aa8.95□□□□□ -0.98
CRNDE-208ENST00000560029 FAM177BA6PVY3 158 aa8.94□□□□□ -0.98
CRNDE-208ENST00000560029 ABI1Q8IZP0 508 aa8.94□□□□□ -0.98
CRNDE-208ENST00000560029 HHIPQ96QV1 700 aa8.94□□□□□ -0.98
CRNDE-208ENST00000560029 RUSC1Q9BVN2 902 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms