RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	ZNF589	Q86UQ0	364 aa	Predicted RBP	28.3	■■■□□ 2.12
TM2D3-209	ENST00000560013	HELLS	Q9NRZ9	838 aa		28.3	■■■□□ 2.12
TM2D3-209	ENST00000560013		K7ELQ4	463 aa	Predicted RBP	28.29	■■■□□ 2.12
TM2D3-209	ENST00000560013	PI16	Q6UXB8	463 aa		28.29	■■■□□ 2.12
TM2D3-209	ENST00000560013	MYH7	P12883	1935 aa		28.29	■■■□□ 2.12
TM2D3-209	ENST00000560013	RNF113A	O15541	343 aa	Known RBP	28.29	■■■□□ 2.12
TM2D3-209	ENST00000560013	POLRMT	O00411	1230 aa	Known RBP	28.28	■■■□□ 2.12
TM2D3-209	ENST00000560013	DDR1	Q08345	913 aa		28.28	■■■□□ 2.12
TM2D3-209	ENST00000560013	UBE4A	Q14139	1066 aa		28.28	■■■□□ 2.12
TM2D3-209	ENST00000560013	ZMYM1	Q5SVZ6	1142 aa		28.28	■■■□□ 2.12
TM2D3-209	ENST00000560013	NLGN1	Q8N2Q7	840 aa		28.28	■■■□□ 2.12
TM2D3-209	ENST00000560013	SEC62	Q99442	399 aa	Known RBP	28.28	■■■□□ 2.12
TM2D3-209	ENST00000560013	NECTIN1	Q15223	517 aa		28.27	■■■□□ 2.12
TM2D3-209	ENST00000560013	TTF1	Q15361	905 aa	Predicted RBP	28.27	■■■□□ 2.12
TM2D3-209	ENST00000560013	SNX14	Q9Y5W7	946 aa		28.27	■■■□□ 2.12
TM2D3-209	ENST00000560013	ZFY	P08048	801 aa	Predicted RBP	28.27	■■■□□ 2.12
TM2D3-209	ENST00000560013	NEK4	P51957	841 aa		28.27	■■■□□ 2.12
TM2D3-209	ENST00000560013	RBM8A	Q9Y5S9	174 aa	Known RBP	28.27	■■■□□ 2.12
TM2D3-209	ENST00000560013	IL27	Q8NEV9	243 aa		28.26	■■■□□ 2.11
TM2D3-209	ENST00000560013	CYP2E1	P05181	493 aa	Predicted RBP	28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	KCNJ4	P48050	445 aa		28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	SPRYD3	Q8NCJ5	442 aa		28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	KCNB2	Q92953	911 aa		28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	SLK	Q9H2G2	1235 aa	Predicted RBP	28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	PRPF40B	Q6NWY9	871 aa	Known RBP	28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	RASEF	Q8IZ41	740 aa		28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	ANKRD2	Q9GZV1	360 aa		28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	HMG20B	Q9P0W2	317 aa		28.25	■■■□□ 2.11
TM2D3-209	ENST00000560013	BCAM	P50895	628 aa		28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	GRAP	Q13588	217 aa		28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	SLFNL1	Q499Z3	407 aa		28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	CCDC129	Q6ZRS4	1044 aa		28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	GRAPL	Q8TC17	118 aa	Predicted RBP	28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	MYO5A	Q9Y4I1	1855 aa	Known RBP	28.24	■■■□□ 2.11
TM2D3-209	ENST00000560013	CRY2	Q49AN0	593 aa		28.23	■■■□□ 2.11
TM2D3-209	ENST00000560013	SPATA5	Q8NB90	893 aa		28.23	■■■□□ 2.11
TM2D3-209	ENST00000560013	CAMKK2	Q96RR4	588 aa		28.23	■■■□□ 2.11
TM2D3-209	ENST00000560013	PNPLA7	Q6ZV29	1317 aa		28.23	■■■□□ 2.11
TM2D3-209	ENST00000560013	RPGR	Q92834	1020 aa	Known RBP	28.23	■■■□□ 2.11
TM2D3-209	ENST00000560013	RASGRF1	Q13972	1273 aa		28.22	■■■□□ 2.11
TM2D3-209	ENST00000560013	EZH2	Q15910	746 aa	Known RBP	28.22	■■■□□ 2.11
TM2D3-209	ENST00000560013	CREB3L3	Q68CJ9	461 aa		28.22	■■■□□ 2.11
TM2D3-209	ENST00000560013	ZKSCAN1	P17029	563 aa	Predicted RBP	28.21	■■■□□ 2.11
TM2D3-209	ENST00000560013	EN1	Q05925	392 aa	Predicted RBP	28.21	■■■□□ 2.11
TM2D3-209	ENST00000560013	ZSCAN25	Q6NSZ9	544 aa		28.21	■■■□□ 2.11
TM2D3-209	ENST00000560013	RNF20	Q5VTR2	975 aa		28.21	■■■□□ 2.11
TM2D3-209	ENST00000560013	MAST3	O60307	1309 aa		28.2	■■■□□ 2.11
TM2D3-209	ENST00000560013	WTIP	A6NIX2	430 aa	Predicted RBP	28.2	■■■□□ 2.1
TM2D3-209	ENST00000560013	PIH1D3	Q9NQM4	214 aa	Known RBP	28.2	■■■□□ 2.1
TM2D3-209	ENST00000560013	ZNF804B	A4D1E1	1349 aa		28.2	■■■□□ 2.1
TM2D3-209	ENST00000560013	MCM2	P49736	904 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	CAVIN4	Q5BKX8	364 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	OSBP2	Q969R2	916 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	UPF3B	Q9BZI7	483 aa	Known RBP	28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	NRXN2	Q9P2S2	1712 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	SLC27A2	O14975	620 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	WASHC4	Q2M389	1173 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	APPBP2	Q92624	585 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	DOCK2	Q92608	1830 aa		28.19	■■■□□ 2.1
TM2D3-209	ENST00000560013	HSP90AA1	P07900	732 aa	Known RBP	28.18	■■■□□ 2.1
TM2D3-209	ENST00000560013	GYG1	P46976	350 aa		28.18	■■■□□ 2.1
TM2D3-209	ENST00000560013	RBM17	Q96I25	401 aa	Known RBP	28.18	■■■□□ 2.1
TM2D3-209	ENST00000560013	GNL3L	Q9NVN8	582 aa	Known RBP	28.18	■■■□□ 2.1
TM2D3-209	ENST00000560013		U3KPZ7	1027 aa	Predicted RBP	28.18	■■■□□ 2.1
TM2D3-209	ENST00000560013	KLRG2	A4D1S0	409 aa	Predicted RBP	28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	IDH1	O75874	414 aa	Known RBP	28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	ADD2	P35612	726 aa		28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	SLC9C2	Q5TAH2	1124 aa		28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	DSCC1	Q9BVC3	393 aa		28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	TM6SF1	Q9BZW5	370 aa		28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013		M0R2C6	588 aa		28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	SLC15A2	Q16348	729 aa		28.17	■■■□□ 2.1
TM2D3-209	ENST00000560013	FAM84B	Q96KN1	310 aa	Predicted RBP	28.16	■■■□□ 2.1
TM2D3-209	ENST00000560013	HOXA10	P31260	410 aa	Predicted RBP	28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	UBE3C	Q15386	1083 aa		28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	ADCK5	Q3MIX3	580 aa		28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	VPS37D	Q86XT2	251 aa		28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	ANKRD31	Q8N7Z5	1873 aa		28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	TSGA10IP	Q3SY00	556 aa		28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	JAKMIP1	Q96N16	626 aa	Known RBP	28.15	■■■□□ 2.1
TM2D3-209	ENST00000560013	HSPD1	P10809	573 aa	Known RBP	28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	CAST	P20810	708 aa	Known RBP	28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	SF3B2	Q13435	895 aa	Known RBP	28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	VPS53	Q5VIR6	699 aa		28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	BRIP1	Q9BX63	1249 aa		28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	PUS7L	Q9H0K6	701 aa	Known RBP	28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	STK32B	Q9NY57	414 aa		28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	PARP3	Q9Y6F1	533 aa		28.14	■■■□□ 2.1
TM2D3-209	ENST00000560013	MMP10	P09238	476 aa		28.13	■■■□□ 2.09
TM2D3-209	ENST00000560013	MAP3K12	Q12852	859 aa		28.13	■■■□□ 2.09
TM2D3-209	ENST00000560013	FBXO33	Q7Z6M2	555 aa		28.13	■■■□□ 2.09
TM2D3-209	ENST00000560013	ZSWIM6	Q9HCJ5	1215 aa		28.13	■■■□□ 2.09
TM2D3-209	ENST00000560013	QSER1	Q2KHR3	1735 aa		28.13	■■■□□ 2.09
TM2D3-209	ENST00000560013	CRAMP1	Q96RY5	1269 aa		28.12	■■■□□ 2.09
TM2D3-209	ENST00000560013	ANKIB1	Q9P2G1	1089 aa		28.12	■■■□□ 2.09
TM2D3-209	ENST00000560013	BBOX1	O75936	387 aa		28.12	■■■□□ 2.09
TM2D3-209	ENST00000560013	PDE6A	P16499	860 aa		28.12	■■■□□ 2.09
TM2D3-209	ENST00000560013	PSMA5	P28066	241 aa		28.12	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms