RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 MYH14Q7Z406 1995 aaKnown RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 ANKRD18BA2A2Z9 1011 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 VPS37CA5D8V6 355 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 PDE8AO60658 829 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 PFKFB2O60825 505 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 GADD45BO75293 160 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 CTSWP56202 376 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 HMGN5P82970 282 aaKnown RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 EXOSC10Q01780 885 aaKnown RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 ZSCAN25Q6NSZ9 544 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 CCDC129Q6ZRS4 1044 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 Q6ZUG5 572 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 NECAB1Q8N987 351 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 TTLL11Q8NHH1 800 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 APPBP2Q92624 585 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 CHAMP1Q96JM3 812 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 SEC62Q99442 399 aaKnown RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
SMAD3-212ENST00000559937 RIPOR2Q9Y4F9 1068 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 C4AP0C0L4 1744 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 C4BP0C0L5 1744 aa9.58□□□□□ -0.88
SMAD3-212ENST00000559937 WDR19Q8NEZ3 1342 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 HSPD1P10809 573 aaKnown RBP9.57□□□□□ -0.88
SMAD3-212ENST00000559937 HSP90B1P14625 803 aaKnown RBP9.57□□□□□ -0.88
SMAD3-212ENST00000559937 TTF1Q15361 905 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-212ENST00000559937 ZNF34Q8IZ26 560 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 RGS22Q8NE09 1264 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 SMARCC2Q8TAQ2 1214 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMAD3-212ENST00000559937 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 XAGE2Q96GT9 111 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 SCAND2PQ9GZW5 306 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-212ENST00000559937 ZSCAN16Q9H4T2 348 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-212ENST00000559937 USP21Q9UK80 565 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 ZBTB1Q9Y2K1 713 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 RTL9Q8NET4 1388 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 SCN7AQ01118 1682 aa9.57□□□□□ -0.88
SMAD3-212ENST00000559937 SPATA31A1Q5TZJ5 1347 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 TIAM2Q8IVF5 1701 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 IRS4O14654 1257 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 FIBPO43427 364 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 UQCRFS1P1P0C7P4 283 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 EVCP57679 992 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 DNM1Q05193 864 aaKnown RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 HLFQ16534 295 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 PARP10Q53GL7 1025 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 METTL24Q5JXM2 366 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 ATL3Q6DD88 541 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 NAA16Q6N069 864 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 LDHAL6AQ6ZMR3 332 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 STOX1Q6ZVD7 989 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 ZSCAN30Q86W11 494 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 DZIP3Q86Y13 1208 aaKnown RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 VGLL2Q8N8G2 317 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 ZNF274Q96GC6 653 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 TRPC5Q9UL62 973 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 ZNF330Q9Y3S2 320 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-212ENST00000559937 EP400Q96L91 3159 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 ECM29Q5VYK3 1845 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 SLIT2O94813 1529 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 MROH5Q6ZUA9 1318 aa9.56□□□□□ -0.88
SMAD3-212ENST00000559937 E7EWF7 191 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 M0R2C6 588 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 RGL2O15211 777 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 ITGA6P23229 1130 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-212ENST00000559937 ADORA1P30542 326 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 MCM5P33992 734 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 EIF5P55010 431 aaKnown RBP9.55□□□□□ -0.88
SMAD3-212ENST00000559937 RESTQ13127 1097 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 IMMTQ16891 758 aaKnown RBP9.55□□□□□ -0.88
SMAD3-212ENST00000559937 CDC37L1Q7L3B6 337 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 BRF1Q92994 677 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 OSBP2Q969R2 916 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 TCEANC2Q96MN5 208 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 TRMT112Q9UI30 125 aaKnown RBP9.55□□□□□ -0.88
SMAD3-212ENST00000559937 ZMYM6O95789 1325 aa9.55□□□□□ -0.88
SMAD3-212ENST00000559937 MYH13Q9UKX3 1938 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 PDE8BO95263 885 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 GPTP24298 496 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 ZAP70P43403 619 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 FGD1P98174 961 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-212ENST00000559937 UBE3CQ15386 1083 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 DDB1Q16531 1140 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 FOXD4L6Q3SYB3 417 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-212ENST00000559937 FOXD4L3Q6VB84 417 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-212ENST00000559937 BARGINQ6ZT62 677 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 TTC6Q86TZ1 520 aa9.54□□□□□ -0.88
SMAD3-212ENST00000559937 NSUN7Q8NE18 718 aaKnown RBP9.54□□□□□ -0.88
SMAD3-212ENST00000559937 SMARCC1Q92922 1105 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-212ENST00000559937 GREM2Q9H772 168 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms