RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ANGEL1Q9UNK9 670 aaKnown RBP14.01□□□□□ -0.17
TRAF3-207ENST00000559734 CHL1O00533 1208 aa14□□□□□ -0.17
TRAF3-207ENST00000559734 WNT10BO00744 389 aa14□□□□□ -0.17
TRAF3-207ENST00000559734 FZD1Q9UP38 647 aa14□□□□□ -0.17
TRAF3-207ENST00000559734 PSME4Q14997 1843 aa13.99□□□□□ -0.17
TRAF3-207ENST00000559734 WTIPA6NIX2 430 aaPredicted RBP13.99□□□□□ -0.17
TRAF3-207ENST00000559734 PDE8AO60658 829 aa13.99□□□□□ -0.17
TRAF3-207ENST00000559734 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
TRAF3-207ENST00000559734 ALDH1A1P00352 501 aa13.99□□□□□ -0.17
TRAF3-207ENST00000559734 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
TRAF3-207ENST00000559734 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
TRAF3-207ENST00000559734 SPRYD7Q5W111 196 aa13.99□□□□□ -0.17
TRAF3-207ENST00000559734 OTOP1Q7RTM1 612 aa13.99□□□□□ -0.17
TRAF3-207ENST00000559734 HOXB7P09629 217 aa13.98□□□□□ -0.17
TRAF3-207ENST00000559734 DACT2Q5SW24 774 aa13.98□□□□□ -0.17
TRAF3-207ENST00000559734 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
TRAF3-207ENST00000559734 APOBEC3FQ8IUX4 373 aaKnown RBP13.98□□□□□ -0.17
TRAF3-207ENST00000559734 CFHR5Q9BXR6 569 aa13.98□□□□□ -0.17
TRAF3-207ENST00000559734 MED23Q9ULK4 1368 aa13.97□□□□□ -0.17
TRAF3-207ENST00000559734 MYO3BQ8WXR4 1341 aa13.97□□□□□ -0.17
TRAF3-207ENST00000559734 MANSC4A6NHS7 340 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-207ENST00000559734 PCCAP05165 728 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-207ENST00000559734 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
TRAF3-207ENST00000559734 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
TRAF3-207ENST00000559734 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
TRAF3-207ENST00000559734 CDC5LQ99459 802 aaKnown RBP13.97□□□□□ -0.17
TRAF3-207ENST00000559734 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-207ENST00000559734 EN2P19622 333 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-207ENST00000559734 FXR1P51114 621 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAF3-207ENST00000559734 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.17
TRAF3-207ENST00000559734 ERO1AQ96HE7 468 aa13.96□□□□□ -0.17
TRAF3-207ENST00000559734 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.17
TRAF3-207ENST00000559734 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
TRAF3-207ENST00000559734 STRIP1Q5VSL9 837 aa13.95□□□□□ -0.18
TRAF3-207ENST00000559734 CCDC191Q8NCU4 936 aa13.95□□□□□ -0.18
TRAF3-207ENST00000559734 CLMNQ96JQ2 1002 aa13.95□□□□□ -0.18
TRAF3-207ENST00000559734 COA1Q9GZY4 146 aa13.95□□□□□ -0.18
TRAF3-207ENST00000559734 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
TRAF3-207ENST00000559734 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRAF3-207ENST00000559734 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
TRAF3-207ENST00000559734 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
TRAF3-207ENST00000559734 CTSWP56202 376 aa13.94□□□□□ -0.18
TRAF3-207ENST00000559734 WNK4Q96J92 1243 aa13.94□□□□□ -0.18
TRAF3-207ENST00000559734 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
TRAF3-207ENST00000559734 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
TRAF3-207ENST00000559734 INHBEP58166 350 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 GTF2IP78347 998 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 CRHR2Q13324 411 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 TTLL5Q6EMB2 1281 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 TMEM106CQ9BVX2 250 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 DEFB129Q9H1M3 183 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 GREM2Q9H772 168 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
TRAF3-207ENST00000559734 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
TRAF3-207ENST00000559734 MYCP01106 439 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-207ENST00000559734 ZBTB48P10074 688 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-207ENST00000559734 KLRK1P26718 216 aa13.92□□□□□ -0.18
TRAF3-207ENST00000559734 DLGAP5Q15398 846 aa13.92□□□□□ -0.18
TRAF3-207ENST00000559734 BSDC1Q9NW68 430 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-207ENST00000559734 COLQQ9Y215 455 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-207ENST00000559734 CLRN2A0PK11 232 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 F8W031 263 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-207ENST00000559734 PPP1R12BO60237 982 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-207ENST00000559734 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
TRAF3-207ENST00000559734 KCNJ4P48050 445 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 OTUD7BQ6GQQ9 843 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-207ENST00000559734 VEZTQ9HBM0 779 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 MAP3K2Q9Y2U5 619 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-207ENST00000559734 SSC5DA1L4H1 1573 aa13.91□□□□□ -0.18
TRAF3-207ENST00000559734 ZNF646O15015 1829 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-207ENST00000559734 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
TRAF3-207ENST00000559734 SP3Q02447 781 aa13.9□□□□□ -0.18
TRAF3-207ENST00000559734 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAF3-207ENST00000559734 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
TRAF3-207ENST00000559734 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
TRAF3-207ENST00000559734 LEMD3Q9Y2U8 911 aa13.9□□□□□ -0.18
TRAF3-207ENST00000559734 PCDHAC2Q9Y5I4 1007 aa13.9□□□□□ -0.18
TRAF3-207ENST00000559734 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.19
TRAF3-207ENST00000559734 IREB2P48200 963 aaKnown RBP13.89□□□□□ -0.19
TRAF3-207ENST00000559734 MMP14P50281 582 aa13.89□□□□□ -0.19
TRAF3-207ENST00000559734 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
TRAF3-207ENST00000559734 ZBED3Q96IU2 234 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-207ENST00000559734 RBBP6Q7Z6E9 1792 aaKnown RBP13.88□□□□□ -0.19
TRAF3-207ENST00000559734 MYO1BO43795 1136 aa13.88□□□□□ -0.19
TRAF3-207ENST00000559734 GJA5P36382 358 aa13.88□□□□□ -0.19
TRAF3-207ENST00000559734 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
TRAF3-207ENST00000559734 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
TRAF3-207ENST00000559734 NBPF12Q5TAG4 269 aaPredicted RBP13.88□□□□□ -0.19
TRAF3-207ENST00000559734 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
TRAF3-207ENST00000559734 PPP2R3BQ9Y5P8 575 aa13.88□□□□□ -0.19
TRAF3-207ENST00000559734 RBM5P52756 815 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAF3-207ENST00000559734 CAP1Q01518 475 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 RALBP1Q15311 655 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms