RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
BMP4-204ENST00000558961 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
BMP4-204ENST00000558961 USP17L3A6NCW0 530 aa14.15□□□□□ -0.14
BMP4-204ENST00000558961 USP17L4A6NCW7 530 aa14.15□□□□□ -0.14
BMP4-204ENST00000558961 KLRK1P26718 216 aa14.15□□□□□ -0.14
BMP4-204ENST00000558961 ZNF280AP59817 542 aaPredicted RBP14.15□□□□□ -0.14
BMP4-204ENST00000558961 USP17L1Q7RTZ2 530 aa14.15□□□□□ -0.14
BMP4-204ENST00000558961 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
BMP4-204ENST00000558961 API5Q9BZZ5 524 aaKnown RBP14.15□□□□□ -0.14
BMP4-204ENST00000558961 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
BMP4-204ENST00000558961 ECM29Q5VYK3 1845 aa14.15□□□□□ -0.14
BMP4-204ENST00000558961 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
BMP4-204ENST00000558961 EGFRP00533 1210 aa14.14□□□□□ -0.15
BMP4-204ENST00000558961 STRIP1Q5VSL9 837 aa14.14□□□□□ -0.15
BMP4-204ENST00000558961 LDHAL6AQ6ZMR3 332 aa14.14□□□□□ -0.15
BMP4-204ENST00000558961 ZNF594Q96JF6 807 aaPredicted RBP14.14□□□□□ -0.15
BMP4-204ENST00000558961 MYO3BQ8WXR4 1341 aa14.14□□□□□ -0.15
BMP4-204ENST00000558961 DACT2Q5SW24 774 aa14.13□□□□□ -0.15
BMP4-204ENST00000558961 SAMD7Q7Z3H4 446 aa14.13□□□□□ -0.15
BMP4-204ENST00000558961 RASSF10A6NK89 507 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 SNAP23O00161 211 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 TAF5LO75529 589 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 KCNJ4P48050 445 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 TAF7LQ5H9L4 462 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 HELBQ8NG08 1087 aaPredicted RBP14.12□□□□□ -0.15
BMP4-204ENST00000558961 CNNM1Q9NRU3 951 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 RIPOR2Q9Y4F9 1068 aa14.12□□□□□ -0.15
BMP4-204ENST00000558961 TRAF5O00463 557 aa14.11□□□□□ -0.15
BMP4-204ENST00000558961 MMP14P50281 582 aa14.11□□□□□ -0.15
BMP4-204ENST00000558961 FMR1Q06787 632 aaKnown RBP eCLIP14.11□□□□□ -0.15
BMP4-204ENST00000558961 TBC1D10BQ4KMP7 808 aaPredicted RBP14.11□□□□□ -0.15
BMP4-204ENST00000558961 CST9Q5W186 159 aa14.11□□□□□ -0.15
BMP4-204ENST00000558961 INTS3Q68E01 1043 aaKnown RBP14.11□□□□□ -0.15
BMP4-204ENST00000558961 CDC37L1Q7L3B6 337 aa14.11□□□□□ -0.15
BMP4-204ENST00000558961 GLIS2Q9BZE0 524 aaPredicted RBP14.11□□□□□ -0.15
BMP4-204ENST00000558961 PUS3Q9BZE2 481 aaKnown RBP14.11□□□□□ -0.15
BMP4-204ENST00000558961 CD209Q9NNX6 404 aa14.11□□□□□ -0.15
BMP4-204ENST00000558961 MROH5Q6ZUA9 1318 aa14.11□□□□□ -0.15
BMP4-204ENST00000558961 MYH13Q9UKX3 1938 aa14.1□□□□□ -0.15
BMP4-204ENST00000558961 USP17L8P0C7I0 530 aa14.1□□□□□ -0.15
BMP4-204ENST00000558961 IL1R1P14778 569 aa14.1□□□□□ -0.15
BMP4-204ENST00000558961 RFX5P48382 616 aaPredicted RBP14.1□□□□□ -0.15
BMP4-204ENST00000558961 UBE4AQ14139 1066 aa14.1□□□□□ -0.15
BMP4-204ENST00000558961 VGLL2Q8N8G2 317 aa14.1□□□□□ -0.15
BMP4-204ENST00000558961 PITPNM2Q9BZ72 1349 aa14.1□□□□□ -0.15
BMP4-204ENST00000558961 UBTFL1P0CB47 393 aaPredicted RBP14.09□□□□□ -0.15
BMP4-204ENST00000558961 TRIM27P14373 513 aa14.09□□□□□ -0.15
BMP4-204ENST00000558961 ZNF804AQ7Z570 1209 aa14.09□□□□□ -0.15
BMP4-204ENST00000558961 MYOZ2Q9NPC6 264 aa14.09□□□□□ -0.15
BMP4-204ENST00000558961 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
BMP4-204ENST00000558961 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
BMP4-204ENST00000558961 IPO8O15397 1037 aaKnown RBP14.08□□□□□ -0.16
BMP4-204ENST00000558961 FKBP1AP62942 108 aaKnown RBP14.08□□□□□ -0.16
BMP4-204ENST00000558961 LRRC24Q50LG9 513 aa14.08□□□□□ -0.16
BMP4-204ENST00000558961 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
BMP4-204ENST00000558961 ATF7IPQ6VMQ6 1270 aa14.08□□□□□ -0.16
BMP4-204ENST00000558961 GGA3Q9NZ52 723 aa14.08□□□□□ -0.16
BMP4-204ENST00000558961 BCAR3O75815 825 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 PDE8BO95263 885 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 GTF2IP78347 998 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 PTPN12Q05209 780 aaKnown RBP14.07□□□□□ -0.16
BMP4-204ENST00000558961 KRT26Q7Z3Y9 468 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 DCPSQ96C86 337 aaKnown RBP14.07□□□□□ -0.16
BMP4-204ENST00000558961 HHIPL1Q96JK4 782 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 MEIS3Q99687 375 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 MXD3Q9BW11 206 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 FBXO3Q9UK99 471 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 HDAC5Q9UQL6 1122 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 PCNTO95613 3336 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 ASTN2O75129 1339 aaPredicted RBP14.07□□□□□ -0.16
BMP4-204ENST00000558961 FAM205AQ6ZU69 1335 aa14.07□□□□□ -0.16
BMP4-204ENST00000558961 PAPPA2Q9BXP8 1791 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 PLIN1O60240 522 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 CELF2O95319 508 aaKnown RBP14.06□□□□□ -0.16
BMP4-204ENST00000558961 VEGFBP49765 207 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 MTX1Q13505 466 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 RBM26Q5T8P6 1007 aaKnown RBP14.06□□□□□ -0.16
BMP4-204ENST00000558961 SAPCD2Q86UD0 394 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 OGFOD1Q8N543 542 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 CERS5Q8N5B7 392 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 TDRD7Q8NHU6 1098 aaKnown RBP14.06□□□□□ -0.16
BMP4-204ENST00000558961 KLHDC4Q8TBB5 520 aa14.06□□□□□ -0.16
BMP4-204ENST00000558961 ZBED3Q96IU2 234 aaPredicted RBP14.06□□□□□ -0.16
BMP4-204ENST00000558961 ABT1Q9ULW3 272 aaKnown RBP14.06□□□□□ -0.16
BMP4-204ENST00000558961 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
BMP4-204ENST00000558961 EYA2O00167 538 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 WNT10BO00744 389 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 SASH1O94885 1247 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 GNAI3P08754 354 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 FGFR2P21802 821 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 SCARF1Q14162 830 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 METTL24Q5JXM2 366 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 ANGEL2Q5VTE6 544 aaKnown RBP14.05□□□□□ -0.16
BMP4-204ENST00000558961 ATG9AQ7Z3C6 839 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 USP48Q86UV5 1035 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
BMP4-204ENST00000558961 FAM84BQ96KN1 310 aaPredicted RBP14.05□□□□□ -0.16
BMP4-204ENST00000558961 COL1A1P02452 1464 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms