RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
VPS13C-207ENST00000558919 GPR182O15218 404 aa6.88□□□□□ -1.31
VPS13C-207ENST00000558919 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
VPS13C-207ENST00000558919 AEBP1Q8IUX7 1158 aa6.88□□□□□ -1.31
VPS13C-207ENST00000558919 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
VPS13C-207ENST00000558919 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
VPS13C-207ENST00000558919 POP1Q99575 1024 aaKnown RBP6.88□□□□□ -1.31
VPS13C-207ENST00000558919 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
VPS13C-207ENST00000558919 C1QTNF9BB2RNN3 333 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 C9orf172C9J069 976 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 CPNE3O75131 537 aaKnown RBP6.87□□□□□ -1.31
VPS13C-207ENST00000558919 ACPPP15309 386 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 PTPRAP18433 802 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 MAPK1P28482 360 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 CDC27P30260 824 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 CHRNA4P43681 627 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 GRIK4Q16099 956 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 GPAT2Q6NUI2 795 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 CD163Q86VB7 1156 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 OSMRQ99650 979 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 NIF3L1Q9GZT8 377 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 DNAJC25Q9H1X3 360 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 PPME1Q9Y570 386 aa6.87□□□□□ -1.31
VPS13C-207ENST00000558919 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
VPS13C-207ENST00000558919 PDE2AO00408 941 aaPredicted RBP6.86□□□□□ -1.31
VPS13C-207ENST00000558919 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
VPS13C-207ENST00000558919 TMC7Q7Z402 723 aa6.86□□□□□ -1.31
VPS13C-207ENST00000558919 NXPE3Q969Y0 559 aa6.86□□□□□ -1.31
VPS13C-207ENST00000558919 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
VPS13C-207ENST00000558919 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
VPS13C-207ENST00000558919 MSTNO14793 375 aa6.85□□□□□ -1.31
VPS13C-207ENST00000558919 DEAF1O75398 565 aaPredicted RBP6.85□□□□□ -1.31
VPS13C-207ENST00000558919 SELPP16109 830 aa6.85□□□□□ -1.31
VPS13C-207ENST00000558919 NRG1Q02297 640 aaPredicted RBP6.85□□□□□ -1.31
VPS13C-207ENST00000558919 ORC1Q13415 861 aa6.85□□□□□ -1.31
VPS13C-207ENST00000558919 ADAMTSL4Q6UY14 1074 aa6.85□□□□□ -1.31
VPS13C-207ENST00000558919 LENG1Q96BZ8 264 aaPredicted RBP6.85□□□□□ -1.31
VPS13C-207ENST00000558919 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
VPS13C-207ENST00000558919 DLL1O00548 723 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 EIF1AYO14602 144 aaKnown RBP6.84□□□□□ -1.31
VPS13C-207ENST00000558919 TRPA1O75762 1119 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 PROCP04070 461 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 POLR3DP05423 398 aaPredicted RBP6.84□□□□□ -1.31
VPS13C-207ENST00000558919 SETDB1Q15047 1291 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 USPL1Q5W0Q7 1092 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 IGF2-ASQ6U949 168 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
VPS13C-207ENST00000558919 HHIPQ96QV1 700 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 CSRNP1Q96S65 589 aa6.84□□□□□ -1.31
VPS13C-207ENST00000558919 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
VPS13C-207ENST00000558919 A0A1W2PP55 124 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 LINC01387J3KSC0 135 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 TREHO43280 583 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 EPHA1P21709 976 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 CABP4P57796 275 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 ADGRE1Q14246 886 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 DSC3Q14574 896 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 KIAA0319Q5VV43 1072 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 WNT8BQ93098 351 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 ASB16Q96NS5 453 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 SH2B1Q9NRF2 756 aaPredicted RBP6.83□□□□□ -1.32
VPS13C-207ENST00000558919 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
VPS13C-207ENST00000558919 H3BRJ5 948 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 GATA4P43694 442 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 SND1Q7KZF4 910 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS13C-207ENST00000558919 KLHL23Q8NBE8 558 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 BSNDQ8WZ55 320 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 CCDC74AQ96AQ1 378 aa6.82□□□□□ -1.32
VPS13C-207ENST00000558919 FSCN2O14926 492 aa6.81□□□□□ -1.32
VPS13C-207ENST00000558919 TXNDC11Q6PKC3 985 aa6.81□□□□□ -1.32
VPS13C-207ENST00000558919 CCNJLQ8IV13 435 aa6.81□□□□□ -1.32
VPS13C-207ENST00000558919 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
VPS13C-207ENST00000558919 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
VPS13C-207ENST00000558919 USP21Q9UK80 565 aa6.81□□□□□ -1.32
VPS13C-207ENST00000558919 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
VPS13C-207ENST00000558919 TM4SF5O14894 197 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 PIP4K2BP78356 416 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 MBTPS1Q14703 1052 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 GALNT11Q8NCW6 608 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 TCF12Q99081 682 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
VPS13C-207ENST00000558919 OSGEPQ9NPF4 335 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 SEC31BQ9NQW1 1179 aa6.8□□□□□ -1.32
VPS13C-207ENST00000558919 CDC25BP30305 580 aa6.79□□□□□ -1.32
VPS13C-207ENST00000558919 CD68P34810 354 aaPredicted RBP6.79□□□□□ -1.32
VPS13C-207ENST00000558919 ENOX2Q16206 610 aaKnown RBP6.79□□□□□ -1.32
VPS13C-207ENST00000558919 VN1R5Q7Z5H4 357 aa6.79□□□□□ -1.32
VPS13C-207ENST00000558919 TXNRD3Q86VQ6 643 aa6.79□□□□□ -1.32
VPS13C-207ENST00000558919 TMEM130Q8N3G9 435 aa6.79□□□□□ -1.32
VPS13C-207ENST00000558919 EHD4Q9H223 541 aa6.79□□□□□ -1.32
VPS13C-207ENST00000558919 A0A096LPE4 126 aa6.78□□□□□ -1.32
VPS13C-207ENST00000558919 A0A1W2PPZ6 126 aa6.78□□□□□ -1.32
VPS13C-207ENST00000558919 ARL4DP49703 201 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms