RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 M0R2C6 588 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 TPTE2Q6XPS3 522 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
CSPG4P5-201ENST00000558731 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 NTSR2O95665 410 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 BRF1Q92994 677 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 CCT2P78371 535 aaKnown RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 LPIN2Q92539 896 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 MAST3O60307 1309 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 ITGB4P16144 1822 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 ZNF609O15014 1411 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 MAGEB6Q8N7X4 407 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 LRP6O75581 1613 aa12.86□□□□□ -0.35
CSPG4P5-201ENST00000558731 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 CYP21A2P08686 494 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 HSP90AA2PQ14568 343 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 GPAA1O43292 621 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 Q6ZUG5 572 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 PIH1D3Q9NQM4 214 aaKnown RBP12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P5-201ENST00000558731 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 HSPD1P10809 573 aaKnown RBP12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 WWC3Q9ULE0 1092 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 CYP2E1P05181 493 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 GJB2P29033 226 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 ZNF532Q9HCE3 1301 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 FIBPO43427 364 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 ME3Q16798 604 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 SPATA5Q8NB90 893 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 NARFQ9UHQ1 456 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 MROH5Q6ZUA9 1318 aa12.84□□□□□ -0.35
CSPG4P5-201ENST00000558731 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 GPR101Q96P66 508 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 TPCN1Q9ULQ1 816 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 GOLGB1Q14789 3259 aaKnown RBP12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 APBA3O96018 575 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 MAP3K12Q12852 859 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 CAVIN4Q5BKX8 364 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 LRRC4BQ9NT99 713 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 HMG20BQ9P0W2 317 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 TRDNQ13061 729 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 IMMTQ16891 758 aaKnown RBP12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
CSPG4P5-201ENST00000558731 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 GLI3P10071 1580 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZNF213O14771 459 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 TDO2P48775 406 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 KRT32Q14532 448 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 LARP1BQ659C4 914 aaKnown RBP12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 NYXQ9GZU5 481 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 MBD4O95243 580 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 RPS8P62241 208 aaKnown RBP12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 CLEC4GQ6UXB4 293 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 APPBP2Q92624 585 aa12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 NSFL1CQ9UNZ2 370 aaKnown RBP12.82□□□□□ -0.36
CSPG4P5-201ENST00000558731 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 H3BQV1 296 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 CCDC144CPQ8IYA2 1237 aa12.81□□□□□ -0.36
CSPG4P5-201ENST00000558731 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms