RNA–Protein interactions for RNA: ENST00000558547.1

PIF1-204, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-204ENST00000558547 NFE2L2Q16236 605 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 ARMC9Q7Z3E5 817 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 ZNF333Q96JL9 665 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 PLEKHF1Q96S99 279 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 EFCC1Q9HA90 598 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 LAMA3Q16787 3333 aa9.38□□□□□ -0.91
PIF1-204ENST00000558547 SSC5DA1L4H1 1573 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 MANSC4A6NHS7 340 aaPredicted RBP9.37□□□□□ -0.91
PIF1-204ENST00000558547 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
PIF1-204ENST00000558547 DACT2Q5SW24 774 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 WNK4Q96J92 1243 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 CCDC85AQ96PX6 553 aaPredicted RBP9.37□□□□□ -0.91
PIF1-204ENST00000558547 PTPN18Q99952 460 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
PIF1-204ENST00000558547 OTOFQ9HC10 1997 aa9.36□□□□□ -0.91
PIF1-204ENST00000558547 GJA5P36382 358 aa9.36□□□□□ -0.91
PIF1-204ENST00000558547 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
PIF1-204ENST00000558547 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
PIF1-204ENST00000558547 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
PIF1-204ENST00000558547 CUL9Q8IWT3 2517 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 INHBEP58166 350 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 SP3Q02447 781 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 PLBD2Q8NHP8 589 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
PIF1-204ENST00000558547 XDHP47989 1333 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 CLSPNQ9HAW4 1339 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 NEFMP07197 916 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 ZBTB48P10074 688 aaPredicted RBP9.34□□□□□ -0.91
PIF1-204ENST00000558547 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 PCDHAC2Q9Y5I4 1007 aa9.34□□□□□ -0.91
PIF1-204ENST00000558547 SOX1O00570 391 aaPredicted RBP9.33□□□□□ -0.92
PIF1-204ENST00000558547 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
PIF1-204ENST00000558547 APOBEC3FQ8IUX4 373 aaKnown RBP9.33□□□□□ -0.92
PIF1-204ENST00000558547 DPF3Q92784 378 aa9.33□□□□□ -0.92
PIF1-204ENST00000558547 SHISA4Q96DD7 197 aa9.33□□□□□ -0.92
PIF1-204ENST00000558547 ZBED3Q96IU2 234 aaPredicted RBP9.33□□□□□ -0.92
PIF1-204ENST00000558547 DEFB129Q9H1M3 183 aa9.33□□□□□ -0.92
PIF1-204ENST00000558547 PRO3102Q9H379 93 aa9.33□□□□□ -0.92
PIF1-204ENST00000558547 AOX1Q06278 1338 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 TRIM26Q12899 539 aaPredicted RBP9.32□□□□□ -0.92
PIF1-204ENST00000558547 MAP3K11Q16584 847 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 NBPF11Q86T75 865 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 LRCH3Q96II8 777 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 ARHGAP39Q9C0H5 1083 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 MED23Q9ULK4 1368 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 LAMA2P24043 3122 aaKnown RBP9.32□□□□□ -0.92
PIF1-204ENST00000558547 EYSQ5T1H1 3165 aa9.32□□□□□ -0.92
PIF1-204ENST00000558547 TESPA1A2RU30 521 aaPredicted RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 USP2O75604 605 aaPredicted RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 ECM2O94769 699 aaPredicted RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 KLRK1P26718 216 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 RIPK4P57078 832 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 TRIM28Q13263 835 aaKnown RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 MTFR1Q15390 333 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 NBPF12Q5TAG4 269 aaPredicted RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 STRIP1Q5VSL9 837 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 OTUD7BQ6GQQ9 843 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 ANKRD18AQ8IVF6 992 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 ZBTB38Q8NAP3 1195 aaPredicted RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 ELP3Q9H9T3 547 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 COL1A1P02452 1464 aaPredicted RBP9.31□□□□□ -0.92
PIF1-204ENST00000558547 MYO3BQ8WXR4 1341 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 MAPK8IP3Q9UPT6 1336 aa9.31□□□□□ -0.92
PIF1-204ENST00000558547 CLRN2A0PK11 232 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 CCT4P50991 539 aaKnown RBP9.3□□□□□ -0.92
PIF1-204ENST00000558547 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 TTLL5Q6EMB2 1281 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 OPTNQ96CV9 577 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 MS4A4AQ96JQ5 239 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 MINPP1Q9UNW1 487 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 MYH3P11055 1940 aa9.3□□□□□ -0.92
PIF1-204ENST00000558547 PPP1R12BO60237 982 aaPredicted RBP9.29□□□□□ -0.92
PIF1-204ENST00000558547 PDE8AO60658 829 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 GTF2IP78347 998 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 DLGAP5Q15398 846 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
PIF1-204ENST00000558547 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 CERS5Q8N5B7 392 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 BRI3BPQ8WY22 251 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 MYD88Q99836 296 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 LAS1LQ9Y4W2 734 aaKnown RBP9.29□□□□□ -0.92
PIF1-204ENST00000558547 VCANP13611 3396 aa9.29□□□□□ -0.92
PIF1-204ENST00000558547 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
PIF1-204ENST00000558547 F8W031 263 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms