RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 HDXQ7Z353 690 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 PHACTR2O75167 634 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 PDHBP11177 359 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 CYP11B2P19099 503 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 SFSWAPQ12872 951 aaKnown RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 NBPF15Q8N660 670 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 RABGGTAQ92696 567 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 DNAAF2Q9NVR5 837 aaKnown RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 COL17A1Q9UMD9 1497 aaPredicted RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 A0A1B0GVG6 124 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 CAVIN2O95810 425 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 SMTNP53814 917 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 DEUP1Q05D60 604 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 CEP57Q86XR8 500 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 TMEM98Q9Y2Y6 226 aa12.64□□□□□ -0.39
SEMA4B-204ENST00000558065 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 GCLCP48506 637 aaPredicted RBP12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 IFT88Q13099 833 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 CARMIL2Q6F5E8 1435 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 RPSAP08865 295 aaKnown RBP12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 SLC7A5Q01650 507 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 SARM1Q6SZW1 724 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 INTS4Q96HW7 963 aaKnown RBP12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 CCDC114Q96M63 670 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 MTRQ99707 1265 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 SUGCTQ9HAC7 445 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 USP5P45974 858 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 PAPOLAP51003 745 aaKnown RBP12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 NUP133Q8WUM0 1156 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 SPATA7Q9P0W8 599 aa12.63□□□□□ -0.39
SEMA4B-204ENST00000558065 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 EZRP15311 586 aaKnown RBP12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 TMF1P82094 1093 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 USP16Q9Y5T5 823 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 M0R2C6 588 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 SASH1O94885 1247 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 GJA8P48165 433 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 BZW1Q7L1Q6 419 aaKnown RBP12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 TBC1D7Q9P0N9 293 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 SYNPO2Q9UMS6 1093 aa12.62□□□□□ -0.39
SEMA4B-204ENST00000558065 SLC27A2O14975 620 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 SLC35B4Q969S0 331 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 ALS2CR12Q96Q35 445 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 YIPF3Q9GZM5 350 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 URI1O94763 535 aaPredicted RBP12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 INHBCP55103 352 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 OSBPL9Q96SU4 736 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 TXLNAP40222 546 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 SDCCAG8Q86SQ7 713 aaPredicted RBP12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 SYNRGQ9UMZ2 1314 aa12.61□□□□□ -0.39
SEMA4B-204ENST00000558065 ERICH2A1L162 156 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 MYBPC3Q14896 1274 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 INF2Q27J81 1249 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 UNC45AQ9H3U1 944 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 KCNJ6P48051 423 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 OGFOD1Q8N543 542 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 GORASP1Q9BQQ3 440 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 LRRIQ1Q96JM4 1722 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 IPO5O00410 1097 aaKnown RBP12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 RNF40O75150 1001 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 C16orf87Q6PH81 154 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 TRIM4Q9C037 500 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 ZNF510Q9Y2H8 683 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 WDR62O43379 1518 aa12.6□□□□□ -0.39
SEMA4B-204ENST00000558065 SYF2O95926 243 aaKnown RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 LINGO3P0C6S8 592 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 GNL2Q13823 731 aaKnown RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 HOOK2Q96ED9 719 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 VCPKMTQ9H867 229 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 PAPOLBQ9NRJ5 636 aaKnown RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 ZBTB40Q9NUA8 1239 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 CORO1CQ9ULV4 474 aaPredicted RBP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 PTPRGP23470 1445 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 F8VZ95 297 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 G3BP1Q13283 466 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 E2F5Q15329 346 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 SNCBQ16143 134 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 PKN1Q16512 942 aa12.59□□□□□ -0.39
SEMA4B-204ENST00000558065 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms