RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 LMBR1LQ6UX01 489 aa11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 JMYQ8N9B5 988 aa11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 DPF2Q92785 391 aa11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 C9orf78Q9NZ63 289 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 TRPM7Q96QT4 1865 aa11.12□□□□□ -0.63
SNRPA1-206ENST00000558059 UTYO14607 1347 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 NBPF7P0C2Y1 421 aaPredicted RBP11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 IFIT5Q13325 482 aaKnown RBP11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 LEMD3Q9Y2U8 911 aa11.11□□□□□ -0.63
SNRPA1-206ENST00000558059 G3V3G9 751 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 H7C1D1 291 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 RPS12P25398 132 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 CHRNDQ07001 517 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 PODNQ7Z5L7 613 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 TXNRD3Q86VQ6 643 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 SMC4Q9NTJ3 1288 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 MED23Q9ULK4 1368 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 A0A1B0GUL6 1792 aa11.1□□□□□ -0.63
SNRPA1-206ENST00000558059 TMEM88BA6NKF7 163 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 SNAP23O00161 211 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 EGFRP00533 1210 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 KLRK1P26718 216 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 BRPF1P55201 1214 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 SAMD7Q7Z3H4 446 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 GMLQ99445 158 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 ZNF804BA4D1E1 1349 aa11.09□□□□□ -0.63
SNRPA1-206ENST00000558059 TRAF5O00463 557 aa11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 TAF5LO75529 589 aa11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 CCDC57Q2TAC2 916 aa11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 RABL6Q3YEC7 729 aaPredicted RBP11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 ANKRD44Q8N8A2 993 aa11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 BICC1Q9H694 974 aaKnown RBP11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 ZNF609O15014 1411 aa11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 IRS2Q9Y4H2 1338 aa11.08□□□□□ -0.64
SNRPA1-206ENST00000558059 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 ZNF280AP59817 542 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 CST9Q5W186 159 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 USP17L1Q7RTZ2 530 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 COA1Q9GZY4 146 aa11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 NOB1Q9ULX3 412 aaKnown RBP11.07□□□□□ -0.64
SNRPA1-206ENST00000558059 CNTNAP1P78357 1384 aa11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 KCNJ4P48050 445 aa11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 TAF7LQ5H9L4 462 aa11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 DACT2Q5SW24 774 aa11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
SNRPA1-206ENST00000558059 RASSF10A6NK89 507 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 USP17L8P0C7I0 530 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 STRIP1Q5VSL9 837 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 CDC37L1Q7L3B6 337 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 CNNM1Q9NRU3 951 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
SNRPA1-206ENST00000558059 PLIN1O60240 522 aa11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 VEGFBP49765 207 aa11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 DEFB115Q30KQ5 88 aa11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 TTLL5Q6EMB2 1281 aa11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 DLK2Q6UY11 383 aa11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 API5Q9BZZ5 524 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 ASTN2O75129 1339 aaPredicted RBP11.04□□□□□ -0.64
SNRPA1-206ENST00000558059 CELF2O95319 508 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-206ENST00000558059 GTF2IP78347 998 aa11.03□□□□□ -0.64
SNRPA1-206ENST00000558059 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
SNRPA1-206ENST00000558059 LRRC24Q50LG9 513 aa11.03□□□□□ -0.64
SNRPA1-206ENST00000558059 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
SNRPA1-206ENST00000558059 ABT1Q9ULW3 272 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-206ENST00000558059 BCAR3O75815 825 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms