RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 TEX13AQ9BXU3 409 aaPredicted RBP7.89□□□□□ -1.15
TRPM1-204ENST00000557948 NIP7Q9Y221 180 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRPM1-204ENST00000557948 G3V3G9 751 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 TNFRSF10AO00220 468 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 HOXA10P31260 410 aaPredicted RBP7.88□□□□□ -1.15
TRPM1-204ENST00000557948 ARHGEF6Q15052 776 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 SLC51AQ86UW1 340 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 GPIHBP1Q8IV16 184 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 RBM17Q96I25 401 aaKnown RBP7.88□□□□□ -1.15
TRPM1-204ENST00000557948 LGR6Q9HBX8 967 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 PTCH2Q9Y6C5 1203 aa7.88□□□□□ -1.15
TRPM1-204ENST00000557948 KIF7Q2M1P5 1343 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 EVI5O60447 810 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 INHBEP58166 350 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 SP3Q02447 781 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 KIAA2012Q0VF49 1180 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 MAP3K12Q12852 859 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 LRIT3Q3SXY7 679 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 ANGEL2Q5VTE6 544 aaKnown RBP7.87□□□□□ -1.15
TRPM1-204ENST00000557948 DPP8Q6V1X1 898 aaPredicted RBP7.87□□□□□ -1.15
TRPM1-204ENST00000557948 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 CRAMP1Q96RY5 1269 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 CARD11Q9BXL7 1154 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 RTFDC1Q9BY42 306 aaPredicted RBP7.87□□□□□ -1.15
TRPM1-204ENST00000557948 EYSQ5T1H1 3165 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 PRUNE2Q8WUY3 3088 aa7.87□□□□□ -1.15
TRPM1-204ENST00000557948 TAF1P21675 1872 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 MANSC4A6NHS7 340 aaPredicted RBP7.86□□□□□ -1.15
TRPM1-204ENST00000557948 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
TRPM1-204ENST00000557948 YDJCA8MPS7 323 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 PSMD14O00487 310 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 A1BGP04217 495 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 RPS12P25398 132 aaKnown RBP7.86□□□□□ -1.15
TRPM1-204ENST00000557948 SHISA4Q96DD7 197 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 ZNF496Q96IT1 587 aaPredicted RBP7.86□□□□□ -1.15
TRPM1-204ENST00000557948 POLKQ9UBT6 870 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 ATP6V0A2Q9Y487 856 aa7.86□□□□□ -1.15
TRPM1-204ENST00000557948 ZNF646O15015 1829 aaPredicted RBP7.86□□□□□ -1.15
TRPM1-204ENST00000557948 MUC3AQ02505 3323 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 ASTN2O75129 1339 aaPredicted RBP7.85□□□□□ -1.15
TRPM1-204ENST00000557948 IRS2Q9Y4H2 1338 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 RNMTO43148 476 aaKnown RBP7.85□□□□□ -1.15
TRPM1-204ENST00000557948 BMP8BP34820 402 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 NF2P35240 595 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 BCAMP50895 628 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 SPRYD7Q5W111 196 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 NUTM1Q86Y26 1132 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 AEBP1Q8IUX7 1158 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 SH3TC2Q8TF17 1288 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 NYXQ9GZU5 481 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 LAMA2P24043 3122 aaKnown RBP7.85□□□□□ -1.15
TRPM1-204ENST00000557948 RIC1Q4ADV7 1423 aa7.85□□□□□ -1.15
TRPM1-204ENST00000557948 ABCC12Q96J65 1359 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 HEG1Q9ULI3 1381 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 SYNGAP1Q96PV0 1343 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 GRXCR2A6NFK2 248 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 SEC24BO95487 1268 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 MAP3K9P80192 1104 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 CRHR2Q13324 411 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 SCARF1Q14162 830 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 OTUD7BQ6GQQ9 843 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 GUCD1Q96NT3 240 aa7.84□□□□□ -1.15
TRPM1-204ENST00000557948 PIEZO1Q92508 2521 aa7.83□□□□□ -1.16
TRPM1-204ENST00000557948 IGF2BP3O00425 579 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRPM1-204ENST00000557948 CAP1Q01518 475 aa7.83□□□□□ -1.16
TRPM1-204ENST00000557948 PTPN12Q05209 780 aaKnown RBP7.83□□□□□ -1.16
TRPM1-204ENST00000557948 UBE2Q1Q7Z7E8 422 aa7.83□□□□□ -1.16
TRPM1-204ENST00000557948 TDHQ8IZJ6 230 aa7.83□□□□□ -1.16
TRPM1-204ENST00000557948 KRI1Q8N9T8 703 aaKnown RBP7.83□□□□□ -1.16
TRPM1-204ENST00000557948 DCBLD2Q96PD2 775 aa7.83□□□□□ -1.16
TRPM1-204ENST00000557948 GDF15Q99988 308 aa7.83□□□□□ -1.16
TRPM1-204ENST00000557948 LAMB1P07942 1786 aa7.82□□□□□ -1.16
TRPM1-204ENST00000557948 GPR37O15354 613 aa7.82□□□□□ -1.16
TRPM1-204ENST00000557948 FARP2O94887 1054 aaPredicted RBP7.82□□□□□ -1.16
TRPM1-204ENST00000557948 GJA8P48165 433 aa7.82□□□□□ -1.16
TRPM1-204ENST00000557948 PIP4K2AP48426 406 aaPredicted RBP7.82□□□□□ -1.16
TRPM1-204ENST00000557948 PRAMEF18Q5VWM3 479 aa7.82□□□□□ -1.16
TRPM1-204ENST00000557948 ARMC9Q7Z3E5 817 aa7.82□□□□□ -1.16
TRPM1-204ENST00000557948 DDX60Q8IY21 1712 aaKnown RBP7.82□□□□□ -1.16
TRPM1-204ENST00000557948 MAFAQ8NHW3 353 aaPredicted RBP7.82□□□□□ -1.16
TRPM1-204ENST00000557948 FAM161BQ96MY7 647 aa7.82□□□□□ -1.16
TRPM1-204ENST00000557948 MTFR1Q15390 333 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 TJAP1Q5JTD0 557 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 FAM109BQ6ICB4 259 aaPredicted RBP7.81□□□□□ -1.16
TRPM1-204ENST00000557948 SULT6B1Q6IMI4 303 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 ZNF790Q6PG37 636 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 SP8Q8IXZ3 490 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 YTHDC1Q96MU7 727 aaKnown RBP7.81□□□□□ -1.16
TRPM1-204ENST00000557948 DBNDD1Q9H9R9 158 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 SCAF8Q9UPN6 1271 aaKnown RBP7.81□□□□□ -1.16
TRPM1-204ENST00000557948 ALPK3Q96L96 1907 aa7.81□□□□□ -1.16
TRPM1-204ENST00000557948 FANCIQ9NVI1 1328 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 GJB1P08034 283 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 ZBTB48P10074 688 aaPredicted RBP7.8□□□□□ -1.16
TRPM1-204ENST00000557948 PRKG1Q13976 671 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 OXER1Q8TDS5 423 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 SLC10A4Q96EP9 437 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 FMNL2Q96PY5 1086 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 TESK2Q96S53 571 aa7.8□□□□□ -1.16
TRPM1-204ENST00000557948 HCN4Q9Y3Q4 1203 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms