RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
NEDD1-213ENST00000557644 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
NEDD1-213ENST00000557644 ADORA1P30542 326 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 KIAA2012Q0VF49 1180 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 EYA3Q99504 573 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 ZC3H12CQ9C0D7 883 aaKnown RBP18.84■□□□□ 0.61
NEDD1-213ENST00000557644 COL4A5P29400 1685 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 GYG1P46976 350 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 NEUROD6Q96NK8 337 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 AKAP2Q9Y2D5 859 aa18.84■□□□□ 0.61
NEDD1-213ENST00000557644 ZNF609O15014 1411 aa18.83■□□□□ 0.61
NEDD1-213ENST00000557644 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.61
NEDD1-213ENST00000557644 DOK7Q18PE1 504 aa18.83■□□□□ 0.61
NEDD1-213ENST00000557644 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.61
NEDD1-213ENST00000557644 CCDC136Q96JN2 1154 aa18.83■□□□□ 0.61
NEDD1-213ENST00000557644 MED23Q9ULK4 1368 aa18.83■□□□□ 0.61
NEDD1-213ENST00000557644 IFIT1P09914 478 aaKnown RBP18.83■□□□□ 0.6
NEDD1-213ENST00000557644 SLC5A1P13866 664 aa18.83■□□□□ 0.6
NEDD1-213ENST00000557644 LMNB1P20700 586 aa18.83■□□□□ 0.6
NEDD1-213ENST00000557644 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.6
NEDD1-213ENST00000557644 CCDC8Q9H0W5 538 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-213ENST00000557644 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.6
NEDD1-213ENST00000557644 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
NEDD1-213ENST00000557644 AACSQ86V21 672 aa18.82■□□□□ 0.6
NEDD1-213ENST00000557644 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
NEDD1-213ENST00000557644 GPR108Q9NPR9 543 aa18.82■□□□□ 0.6
NEDD1-213ENST00000557644 BCAMP50895 628 aa18.82■□□□□ 0.6
NEDD1-213ENST00000557644 CLASRPQ8N2M8 674 aaKnown RBP18.82■□□□□ 0.6
NEDD1-213ENST00000557644 XAGE2Q96GT9 111 aa18.82■□□□□ 0.6
NEDD1-213ENST00000557644 C9orf131Q5VYM1 1079 aa18.81■□□□□ 0.6
NEDD1-213ENST00000557644 C15orf52Q6ZUT6 534 aaKnown RBP18.81■□□□□ 0.6
NEDD1-213ENST00000557644 DBNDD2Q9BQY9 259 aa18.81■□□□□ 0.6
NEDD1-213ENST00000557644 PPP4R2Q9NY27 417 aa18.81■□□□□ 0.6
NEDD1-213ENST00000557644 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
NEDD1-213ENST00000557644 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
NEDD1-213ENST00000557644 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
NEDD1-213ENST00000557644 C16orf71Q8IYS4 520 aaPredicted RBP18.8■□□□□ 0.6
NEDD1-213ENST00000557644 VPS33BQ9H267 617 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 SBF1O95248 1867 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 HIBADHP31937 336 aaKnown RBP18.79■□□□□ 0.6
NEDD1-213ENST00000557644 PHKA1P46020 1223 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 FBXO33Q7Z6M2 555 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
NEDD1-213ENST00000557644 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
NEDD1-213ENST00000557644 YDJCA8MPS7 323 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 ECE2O60344 883 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 CAVIN4Q5BKX8 364 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 G3V3G9 751 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 DCAF8Q5TAQ9 597 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 VPS37DQ86XT2 251 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 NIM1KQ8IY84 436 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 OTUD7AQ8TE49 926 aaPredicted RBP18.78■□□□□ 0.6
NEDD1-213ENST00000557644 JDP2Q8WYK2 163 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 CD209Q9NNX6 404 aa18.78■□□□□ 0.6
NEDD1-213ENST00000557644 IFIT2P09913 472 aaKnown RBP18.77■□□□□ 0.6
NEDD1-213ENST00000557644 NUCB1Q02818 461 aa18.77■□□□□ 0.6
NEDD1-213ENST00000557644 ZNF804AQ7Z570 1209 aa18.77■□□□□ 0.6
NEDD1-213ENST00000557644 COA1Q9GZY4 146 aa18.77■□□□□ 0.6
NEDD1-213ENST00000557644 GORABQ5T7V8 394 aa18.77■□□□□ 0.6
NEDD1-213ENST00000557644 CHD1LQ86WJ1 897 aa18.76■□□□□ 0.59
NEDD1-213ENST00000557644 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-213ENST00000557644 ZBTB47Q9UFB7 747 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-213ENST00000557644 ZNRF3Q9ULT6 936 aa18.76■□□□□ 0.59
NEDD1-213ENST00000557644 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
NEDD1-213ENST00000557644 ARAP2Q8WZ64 1704 aa18.75■□□□□ 0.59
NEDD1-213ENST00000557644 IL1R1P14778 569 aa18.75■□□□□ 0.59
NEDD1-213ENST00000557644 TSHZ3Q63HK5 1081 aa18.75■□□□□ 0.59
NEDD1-213ENST00000557644 PODNQ7Z5L7 613 aa18.75■□□□□ 0.59
NEDD1-213ENST00000557644 FZD9O00144 591 aa18.74■□□□□ 0.59
NEDD1-213ENST00000557644 RAD17O75943 681 aa18.74■□□□□ 0.59
NEDD1-213ENST00000557644 TDRD7Q8NHU6 1098 aaKnown RBP18.74■□□□□ 0.59
NEDD1-213ENST00000557644 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
NEDD1-213ENST00000557644 SCARF1Q14162 830 aa18.74■□□□□ 0.59
NEDD1-213ENST00000557644 CHD4Q14839 1912 aa18.74■□□□□ 0.59
NEDD1-213ENST00000557644 ZNF541Q9H0D2 1346 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 FRAT2O75474 233 aaPredicted RBP18.73■□□□□ 0.59
NEDD1-213ENST00000557644 SKAP1Q86WV1 359 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 CXCL9Q07325 125 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 RASGRF1Q13972 1273 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 TTC39AQ5SRH9 613 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 PI16Q6UXB8 463 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 FBXW7Q969H0 707 aa18.73■□□□□ 0.59
NEDD1-213ENST00000557644 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
NEDD1-213ENST00000557644 COL1A1P02452 1464 aaPredicted RBP18.72■□□□□ 0.59
NEDD1-213ENST00000557644 GTF2IP78347 998 aa18.72■□□□□ 0.59
NEDD1-213ENST00000557644 CHAF1AQ13111 956 aaPredicted RBP18.71■□□□□ 0.59
NEDD1-213ENST00000557644 MXD3Q9BW11 206 aa18.71■□□□□ 0.59
NEDD1-213ENST00000557644 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
NEDD1-213ENST00000557644 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.59
NEDD1-213ENST00000557644 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
NEDD1-213ENST00000557644 MCAMP43121 646 aa18.71■□□□□ 0.59
NEDD1-213ENST00000557644 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
NEDD1-213ENST00000557644 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms