RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 ANKRD2Q9GZV1 360 aa12.49□□□□□ -0.41
GABRB3-212ENST00000557641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-212ENST00000557641 BBOX1O75936 387 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 SLC5A1P13866 664 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 TIMM10P62072 90 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 GORABQ5T7V8 394 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
GABRB3-212ENST00000557641 EVI5LQ96CN4 794 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 ZNF512BQ96KM6 892 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-212ENST00000557641 DBNDD2Q9BQY9 259 aa12.48□□□□□ -0.41
GABRB3-212ENST00000557641 UPF2Q9HAU5 1272 aaKnown RBP12.48□□□□□ -0.41
GABRB3-212ENST00000557641 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
GABRB3-212ENST00000557641 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
GABRB3-212ENST00000557641 FGFR2P21802 821 aa12.47□□□□□ -0.41
GABRB3-212ENST00000557641 CHRNDQ07001 517 aa12.47□□□□□ -0.41
GABRB3-212ENST00000557641 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
GABRB3-212ENST00000557641 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
GABRB3-212ENST00000557641 TLR7Q9NYK1 1049 aaKnown RBP12.47□□□□□ -0.41
GABRB3-212ENST00000557641 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
GABRB3-212ENST00000557641 EP400Q96L91 3159 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 HIP1O00291 1037 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 UQCRFS1P1P0C7P4 283 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 NPR1P16066 1061 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 CCDC24Q8N4L8 307 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
GABRB3-212ENST00000557641 RILPL2Q969X0 211 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 XAGE2Q96GT9 111 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
GABRB3-212ENST00000557641 NRXN2Q9P2S2 1712 aa12.45□□□□□ -0.42
GABRB3-212ENST00000557641 ALDH1B1P30837 517 aa12.45□□□□□ -0.42
GABRB3-212ENST00000557641 TTC39AQ5SRH9 613 aa12.45□□□□□ -0.42
GABRB3-212ENST00000557641 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
GABRB3-212ENST00000557641 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
GABRB3-212ENST00000557641 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-212ENST00000557641 HAUS7Q99871 368 aa12.45□□□□□ -0.42
GABRB3-212ENST00000557641 SRGNP10124 158 aa12.44□□□□□ -0.42
GABRB3-212ENST00000557641 LRRFIP1Q32MZ4 808 aaKnown RBP12.44□□□□□ -0.42
GABRB3-212ENST00000557641 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
GABRB3-212ENST00000557641 BOLA2Q9H3K6 86 aa12.44□□□□□ -0.42
GABRB3-212ENST00000557641 LEMD3Q9Y2U8 911 aa12.44□□□□□ -0.42
GABRB3-212ENST00000557641 RFX7Q2KHR2 1363 aa12.43□□□□□ -0.42
GABRB3-212ENST00000557641 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
GABRB3-212ENST00000557641 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
GABRB3-212ENST00000557641 CHMLP26374 656 aa12.43□□□□□ -0.42
GABRB3-212ENST00000557641 ARID4AP29374 1257 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-212ENST00000557641 STYK1Q6J9G0 422 aa12.43□□□□□ -0.42
GABRB3-212ENST00000557641 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-212ENST00000557641 RUFY2Q8WXA3 655 aa12.43□□□□□ -0.42
GABRB3-212ENST00000557641 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-212ENST00000557641 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
GABRB3-212ENST00000557641 XDHP47989 1333 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
GABRB3-212ENST00000557641 H0YIN7 160 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 TAF5LO75529 589 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 REC8O95072 547 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 ADORA1P30542 326 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 KCNJ4P48050 445 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-212ENST00000557641 CAVIN4Q5BKX8 364 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 CCDC102BQ68D86 513 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
GABRB3-212ENST00000557641 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-212ENST00000557641 GNL3LQ9NVN8 582 aaKnown RBP12.42□□□□□ -0.42
GABRB3-212ENST00000557641 SEMA3EO15041 775 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 ATP2B4P23634 1241 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 POLD1P28340 1107 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
GABRB3-212ENST00000557641 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 DIAPH3Q9NSV4 1193 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 PODXL2Q9NZ53 605 aa12.41□□□□□ -0.42
GABRB3-212ENST00000557641 ZNF804BA4D1E1 1349 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-212ENST00000557641 IGSF3O75054 1194 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 SEC24BO95487 1268 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-212ENST00000557641 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
GABRB3-212ENST00000557641 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 FSD1Q9BTV5 496 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 ATP6V0A2Q9Y487 856 aa12.4□□□□□ -0.42
GABRB3-212ENST00000557641 RAD50Q92878 1312 aa12.39□□□□□ -0.43
GABRB3-212ENST00000557641 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-212ENST00000557641 MFAP1P55081 439 aaKnown RBP12.39□□□□□ -0.43
GABRB3-212ENST00000557641 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
GABRB3-212ENST00000557641 ZSCAN25Q6NSZ9 544 aa12.39□□□□□ -0.43
GABRB3-212ENST00000557641 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-212ENST00000557641 PDS5AQ29RF7 1337 aaKnown RBP12.38□□□□□ -0.43
GABRB3-212ENST00000557641 C10orf71Q711Q0 1435 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 GOLIM4O00461 696 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-212ENST00000557641 PHKA1P46020 1223 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms