RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
SYNE2-226ENST00000557084 TAF5LO75529 589 aa14.98□□□□□ -0.01
SYNE2-226ENST00000557084 ITGBL1O95965 494 aaPredicted RBP14.98□□□□□ -0.01
SYNE2-226ENST00000557084 VIL1P09327 827 aaKnown RBP14.98□□□□□ -0.01
SYNE2-226ENST00000557084 RBM26Q5T8P6 1007 aaKnown RBP14.98□□□□□ -0.01
SYNE2-226ENST00000557084 COA1Q9GZY4 146 aa14.98□□□□□ -0.01
SYNE2-226ENST00000557084 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
SYNE2-226ENST00000557084 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
SYNE2-226ENST00000557084 PASKQ96RG2 1323 aa14.97□□□□□ -0.01
SYNE2-226ENST00000557084 TBC1D10BQ4KMP7 808 aaPredicted RBP14.97□□□□□ -0.01
SYNE2-226ENST00000557084 RSBN1LQ6PCB5 846 aaPredicted RBP14.97□□□□□ -0.01
SYNE2-226ENST00000557084 TRPM4Q8TD43 1214 aa14.97□□□□□ -0.01
SYNE2-226ENST00000557084 ZC3H15Q8WU90 426 aaKnown RBP14.97□□□□□ -0.01
SYNE2-226ENST00000557084 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
SYNE2-226ENST00000557084 SHTN1A0MZ66 631 aa14.96□□□□□ -0.01
SYNE2-226ENST00000557084 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-226ENST00000557084 BRPF1P55201 1214 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-226ENST00000557084 LTBP1Q14766 1721 aa14.96□□□□□ -0.01
SYNE2-226ENST00000557084 SAMD7Q7Z3H4 446 aa14.96□□□□□ -0.01
SYNE2-226ENST00000557084 AGBL3Q8NEM8 1001 aa14.96□□□□□ -0.01
SYNE2-226ENST00000557084 FRAT1Q92837 279 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-226ENST00000557084 SPEF2Q9C093 1822 aa14.95□□□□□ -0.02
SYNE2-226ENST00000557084 ZNF804AQ7Z570 1209 aa14.95□□□□□ -0.02
SYNE2-226ENST00000557084 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
SYNE2-226ENST00000557084 OGFOD1Q8N543 542 aa14.95□□□□□ -0.02
SYNE2-226ENST00000557084 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
SYNE2-226ENST00000557084 KAZALD1Q96I82 304 aa14.95□□□□□ -0.02
SYNE2-226ENST00000557084 MKRN1Q9UHC7 482 aaKnown RBP14.95□□□□□ -0.02
SYNE2-226ENST00000557084 ABT1Q9ULW3 272 aaKnown RBP14.95□□□□□ -0.02
SYNE2-226ENST00000557084 TRAF5O00463 557 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 USP17L8P0C7I0 530 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 KLRK1P26718 216 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 HIRAP54198 1017 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-226ENST00000557084 POLA2Q14181 598 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 KIF4BQ2VIQ3 1234 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 RABL6Q3YEC7 729 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-226ENST00000557084 STRIP1Q5VSL9 837 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 TTLL5Q6EMB2 1281 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 CDC37L1Q7L3B6 337 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
SYNE2-226ENST00000557084 DCPSQ96C86 337 aaKnown RBP14.94□□□□□ -0.02
SYNE2-226ENST00000557084 MROH5Q6ZUA9 1318 aa14.93□□□□□ -0.02
SYNE2-226ENST00000557084 SNAP23O00161 211 aa14.93□□□□□ -0.02
SYNE2-226ENST00000557084 METTL24Q5JXM2 366 aa14.93□□□□□ -0.02
SYNE2-226ENST00000557084 GLIS2Q9BZE0 524 aaPredicted RBP14.93□□□□□ -0.02
SYNE2-226ENST00000557084 MYO3BQ8WXR4 1341 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 BCAR3O75815 825 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 GTF2IP78347 998 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 KRT26Q7Z3Y9 468 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 PUS3Q9BZE2 481 aaKnown RBP14.92□□□□□ -0.02
SYNE2-226ENST00000557084 ZNF408Q9H9D4 720 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 CD209Q9NNX6 404 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 PGAP2Q9UHJ9 254 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
SYNE2-226ENST00000557084 ADAMTSL1Q8N6G6 1762 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 CELF2O95319 508 aaKnown RBP14.91□□□□□ -0.02
SYNE2-226ENST00000557084 EGFRP00533 1210 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-226ENST00000557084 UBE4AQ14139 1066 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 DACT2Q5SW24 774 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 ATF7IPQ6VMQ6 1270 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 C15orf52Q6ZUT6 534 aaKnown RBP14.91□□□□□ -0.02
SYNE2-226ENST00000557084 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-226ENST00000557084 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 VPS37DQ86XT2 251 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 SULF1Q8IWU6 871 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 MYOZ2Q9NPC6 264 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 HDAC9Q9UKV0 1011 aa14.91□□□□□ -0.02
SYNE2-226ENST00000557084 GNAI3P08754 354 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.02
SYNE2-226ENST00000557084 SCARF1Q14162 830 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 DEFB115Q30KQ5 88 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
SYNE2-226ENST00000557084 JMYQ8N9B5 988 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 KLHDC4Q8TBB5 520 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 GMLQ99445 158 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 MXD3Q9BW11 206 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 RIPOR2Q9Y4F9 1068 aa14.9□□□□□ -0.02
SYNE2-226ENST00000557084 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
SYNE2-226ENST00000557084 TRIM27P14373 513 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 HIBADHP31937 336 aaKnown RBP14.89□□□□□ -0.03
SYNE2-226ENST00000557084 MMP14P50281 582 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 LRRC24Q50LG9 513 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 CAVIN4Q5BKX8 364 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 ZKSCAN2Q63HK3 967 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
SYNE2-226ENST00000557084 LRRFIP2Q9Y608 721 aaKnown RBP14.89□□□□□ -0.03
SYNE2-226ENST00000557084 IL1R1P14778 569 aa14.88□□□□□ -0.03
SYNE2-226ENST00000557084 GRM1Q13255 1194 aa14.88□□□□□ -0.03
SYNE2-226ENST00000557084 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
SYNE2-226ENST00000557084 MEIS3Q99687 375 aa14.88□□□□□ -0.03
SYNE2-226ENST00000557084 ZNF609O15014 1411 aa14.88□□□□□ -0.03
SYNE2-226ENST00000557084 EYA2O00167 538 aa14.87□□□□□ -0.03
SYNE2-226ENST00000557084 PDE8BO95263 885 aa14.87□□□□□ -0.03
SYNE2-226ENST00000557084 GYG1P46976 350 aa14.87□□□□□ -0.03
SYNE2-226ENST00000557084 VEGFBP49765 207 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms