RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
SNX6-208ENST00000556712 CNOT7Q9UIV1 285 aaKnown RBP13.02□□□□□ -0.33
SNX6-208ENST00000556712 LRRFIP2Q9Y608 721 aaKnown RBP13.02□□□□□ -0.33
SNX6-208ENST00000556712 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
SNX6-208ENST00000556712 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
SNX6-208ENST00000556712 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
SNX6-208ENST00000556712 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX6-208ENST00000556712 TBC1D10BQ4KMP7 808 aaPredicted RBP13.01□□□□□ -0.33
SNX6-208ENST00000556712 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
SNX6-208ENST00000556712 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 PASKQ96RG2 1323 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 ZNF609O15014 1411 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 CEP350Q5VT06 3117 aa13.01□□□□□ -0.33
SNX6-208ENST00000556712 ITGBL1O95965 494 aaPredicted RBP13□□□□□ -0.33
SNX6-208ENST00000556712 RPS12P25398 132 aaKnown RBP13□□□□□ -0.33
SNX6-208ENST00000556712 RFX5P48382 616 aaPredicted RBP13□□□□□ -0.33
SNX6-208ENST00000556712 RSBN1LQ6PCB5 846 aaPredicted RBP13□□□□□ -0.33
SNX6-208ENST00000556712 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
SNX6-208ENST00000556712 PODNQ7Z5L7 613 aa13□□□□□ -0.33
SNX6-208ENST00000556712 CNTROBQ8N137 903 aa13□□□□□ -0.33
SNX6-208ENST00000556712 COA1Q9GZY4 146 aa13□□□□□ -0.33
SNX6-208ENST00000556712 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
SNX6-208ENST00000556712 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 H7C1D1 291 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 TRAF5O00463 557 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 DACT2Q5SW24 774 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
SNX6-208ENST00000556712 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 DPF2Q92785 391 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 MYH13Q9UKX3 1938 aa12.99□□□□□ -0.33
SNX6-208ENST00000556712 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
SNX6-208ENST00000556712 MROH5Q6ZUA9 1318 aa12.98□□□□□ -0.33
SNX6-208ENST00000556712 RLBP1P12271 317 aa12.98□□□□□ -0.33
SNX6-208ENST00000556712 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
SNX6-208ENST00000556712 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
SNX6-208ENST00000556712 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
SNX6-208ENST00000556712 SIL1Q9H173 461 aa12.98□□□□□ -0.33
SNX6-208ENST00000556712 CD209Q9NNX6 404 aa12.98□□□□□ -0.33
SNX6-208ENST00000556712 ASTN2O75129 1339 aaPredicted RBP12.97□□□□□ -0.33
SNX6-208ENST00000556712 GYG1P46976 350 aa12.97□□□□□ -0.33
SNX6-208ENST00000556712 GTF2IP78347 998 aa12.97□□□□□ -0.33
SNX6-208ENST00000556712 C15orf52Q6ZUT6 534 aaKnown RBP12.97□□□□□ -0.33
SNX6-208ENST00000556712 ZNF804AQ7Z570 1209 aa12.97□□□□□ -0.33
SNX6-208ENST00000556712 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
SNX6-208ENST00000556712 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
SNX6-208ENST00000556712 GMLQ99445 158 aa12.97□□□□□ -0.33
SNX6-208ENST00000556712 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
SNX6-208ENST00000556712 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
SNX6-208ENST00000556712 EYA2O00167 538 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 GNAI3P08754 354 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 UBE4AQ14139 1066 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 DLK2Q6UY11 383 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 ITPRIPQ8IWB1 547 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 DNAJC5GQ8N7S2 189 aa12.96□□□□□ -0.33
SNX6-208ENST00000556712 PDE8BO95263 885 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 ZNF280AP59817 542 aaPredicted RBP12.95□□□□□ -0.34
SNX6-208ENST00000556712 TTLL5Q6EMB2 1281 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
SNX6-208ENST00000556712 CERS5Q8N5B7 392 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 GGA3Q9NZ52 723 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
SNX6-208ENST00000556712 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
SNX6-208ENST00000556712 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
SNX6-208ENST00000556712 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 ADM5C9JUS6 153 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 GNAI2P04899 355 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 IL1R1P14778 569 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 KIAA0825Q8IV33 1275 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
SNX6-208ENST00000556712 YTHDC1Q96MU7 727 aaKnown RBP12.94□□□□□ -0.34
SNX6-208ENST00000556712 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
SNX6-208ENST00000556712 MYO3BQ8WXR4 1341 aa12.93□□□□□ -0.34
SNX6-208ENST00000556712 PNMA6EA0A0J9YXQ4 647 aa12.93□□□□□ -0.34
SNX6-208ENST00000556712 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
SNX6-208ENST00000556712 HIBADHP31937 336 aaKnown RBP12.93□□□□□ -0.34
SNX6-208ENST00000556712 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
SNX6-208ENST00000556712 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
SNX6-208ENST00000556712 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
SNX6-208ENST00000556712 RCAN3Q9UKA8 241 aa12.93□□□□□ -0.34
SNX6-208ENST00000556712 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
SNX6-208ENST00000556712 COL1A1P02452 1464 aaPredicted RBP12.92□□□□□ -0.34
SNX6-208ENST00000556712 CIAO1O76071 339 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 SASH1O94885 1247 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 FGFR2P21802 821 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms