RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.38
GPHN-213ENST00000556501 KIF6Q6ZMV9 814 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 CCDC129Q6ZRS4 1044 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 TCEANC2Q96MN5 208 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 NEK1Q96PY6 1258 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 TMOD3Q9NYL9 352 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 CCDC39Q9UFE4 941 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 NOL7Q9UMY1 257 aaKnown RBP6.4□□□□□ -1.38
GPHN-213ENST00000556501 NDUFB9Q9Y6M9 179 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 DOCK2Q92608 1830 aa6.4□□□□□ -1.38
GPHN-213ENST00000556501 MAST3O60307 1309 aa6.4□□□□□ -1.39
GPHN-213ENST00000556501 CDHR2Q9BYE9 1310 aa6.4□□□□□ -1.39
GPHN-213ENST00000556501 ATRNO75882 1429 aa6.4□□□□□ -1.39
GPHN-213ENST00000556501 C4AP0C0L4 1744 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 C4BP0C0L5 1744 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 ECM29Q5VYK3 1845 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 A0A1B0GUL7 405 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 RNF113AO15541 343 aaKnown RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 ZNF500O60304 480 aaPredicted RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 PFKFB2O60825 505 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 IFIT1P09914 478 aaKnown RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 RESTQ13127 1097 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 LRRFIP1Q32MZ4 808 aaKnown RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 LRRC24Q50LG9 513 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 STOX1Q6ZVD7 989 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 TTC6Q86TZ1 520 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 DNAJC10Q8IXB1 793 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 RNF214Q8ND24 703 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 SMARCC2Q8TAQ2 1214 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 ZNF594Q96JF6 807 aaPredicted RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 NEUROD6Q96NK8 337 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 SEC62Q99442 399 aaKnown RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
GPHN-213ENST00000556501 FUCA2Q9BTY2 467 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 AGXT2Q9BYV1 514 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 STRN4Q9NRL3 753 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 CEP126Q9P2H0 1117 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 MAP3K15Q6ZN16 1313 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 TIAM2Q8IVF5 1701 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 BCORQ6W2J9 1755 aa6.39□□□□□ -1.39
GPHN-213ENST00000556501 OFD1O75665 1012 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 CHGBP05060 677 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 CSF1RP07333 972 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 ZFYP08048 801 aaPredicted RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 MSNP26038 577 aaKnown RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 MNX1P50219 401 aaPredicted RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 EVA1CP58658 441 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 EVX2Q03828 476 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 CCDC57Q2TAC2 916 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 GIGYF2Q6Y7W6 1299 aaKnown RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 Q6ZUG5 572 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 ZBTB38Q8NAP3 1195 aaPredicted RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 PIGBQ92521 554 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 BRF1Q92994 677 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 NAP1L5Q96NT1 182 aaPredicted RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 PUS3Q9BZE2 481 aaKnown RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 ANO8Q9HCE9 1232 aaPredicted RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.38□□□□□ -1.39
GPHN-213ENST00000556501 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 SALL1Q9NSC2 1324 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 A0A1B0GUL6 1792 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 CHD4Q14839 1912 aa6.38□□□□□ -1.39
GPHN-213ENST00000556501 MYO5AQ9Y4I1 1855 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 ZNF831Q5JPB2 1677 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 SLIT2O94813 1529 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 E7EWF7 191 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 M0R2C6 588 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 JAK2O60674 1132 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 DTNBO60941 627 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 STARD3NLO95772 234 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 HSPD1P10809 573 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 HSP90B1P14625 803 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 TIMM10P62072 90 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 HMGN5P82970 282 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 EXOSC10Q01780 885 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 STK3Q13188 491 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 HSP90AB3PQ58FF7 597 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 TTC39AQ5SRH9 613 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 NAA16Q6N069 864 aaPredicted RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 DHX32Q7L7V1 743 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 FERMT3Q86UX7 667 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 FBXL16Q8N461 479 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 NSUN7Q8NE18 718 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 SPDYE1Q8NFV5 336 aaPredicted RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 LEO1Q8WVC0 666 aaPredicted RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 CHMP4CQ96CF2 233 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 NUP62CLQ9H1M0 184 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 CREBZFQ9NS37 354 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 DDX19AQ9NUU7 478 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 ASAP1Q9ULH1 1129 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
GPHN-213ENST00000556501 KIF3AQ9Y496 699 aa6.37□□□□□ -1.39
GPHN-213ENST00000556501 CASZ1Q86V15 1759 aa6.36□□□□□ -1.39
GPHN-213ENST00000556501 COL5A3P25940 1745 aaPredicted RBP6.36□□□□□ -1.39
GPHN-213ENST00000556501 WDR19Q8NEZ3 1342 aa6.36□□□□□ -1.39
GPHN-213ENST00000556501 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms