RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SALL4Q9UJQ4 1053 aa7.93□□□□□ -1.14
SCFD1-219ENST00000556413 RAXQ9Y2V3 346 aa7.93□□□□□ -1.14
SCFD1-219ENST00000556413 ARID3CA6NKF2 412 aa7.92□□□□□ -1.14
SCFD1-219ENST00000556413 DDX3YO15523 660 aaKnown RBP7.92□□□□□ -1.14
SCFD1-219ENST00000556413 RPLP1P05386 114 aaKnown RBP7.92□□□□□ -1.14
SCFD1-219ENST00000556413 FAM117BQ6P1L5 589 aa7.92□□□□□ -1.14
SCFD1-219ENST00000556413 KIAA1211Q6ZU35 1233 aa7.92□□□□□ -1.14
SCFD1-219ENST00000556413 ARMC10Q8N2F6 343 aa7.92□□□□□ -1.14
SCFD1-219ENST00000556413 C1orf127Q8N9H9 656 aa7.92□□□□□ -1.14
SCFD1-219ENST00000556413 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
SCFD1-219ENST00000556413 KRTAP9-6A0A140TA67 174 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 NFKBIEO00221 500 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 ADAM11O75078 769 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 ACPPP15309 386 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
SCFD1-219ENST00000556413 FOXD4L4Q8WXT5 416 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-219ENST00000556413 KLHDC7BQ96G42 594 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 CEP41Q9BYV8 373 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 STOML1Q9UBI4 398 aa7.91□□□□□ -1.14
SCFD1-219ENST00000556413 A6NHS1 94 aa7.9□□□□□ -1.14
SCFD1-219ENST00000556413 DHX15O43143 795 aaKnown RBP7.9□□□□□ -1.14
SCFD1-219ENST00000556413 PDGFAP04085 211 aa7.9□□□□□ -1.14
SCFD1-219ENST00000556413 CES1P23141 567 aa7.9□□□□□ -1.14
SCFD1-219ENST00000556413 DUOXA2Q1HG44 320 aa7.9□□□□□ -1.14
SCFD1-219ENST00000556413 NOM1Q5C9Z4 860 aaKnown RBP7.9□□□□□ -1.14
SCFD1-219ENST00000556413 SEC31BQ9NQW1 1179 aa7.9□□□□□ -1.14
SCFD1-219ENST00000556413 FAM177BA6PVY3 158 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 IGLV1-40P01703 118 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 SSTR4P31391 388 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 C8orf34Q49A92 452 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 UBASH3BQ8TF42 649 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 FAM46AQ96IP4 442 aaKnown RBP7.89□□□□□ -1.15
SCFD1-219ENST00000556413 CHRDQ9H2X0 955 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 PCMTD2Q9NV79 361 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 DZANK1Q9NVP4 752 aa7.89□□□□□ -1.15
SCFD1-219ENST00000556413 H3BRJ5 948 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 GSC2O15499 205 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 TRPA1O75762 1119 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 PCSK2P16519 638 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 MPSTP25325 297 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 MZF1P28698 734 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-219ENST00000556413 EIF1AXP47813 144 aaKnown RBP7.88□□□□□ -1.15
SCFD1-219ENST00000556413 CD97P48960 835 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 UVSSAQ2YD98 709 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 GTF3C2Q8WUA4 911 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-219ENST00000556413 WNT8BQ93098 351 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 UTP4Q969X6 686 aaKnown RBP7.88□□□□□ -1.15
SCFD1-219ENST00000556413 HHIPQ96QV1 700 aa7.88□□□□□ -1.15
SCFD1-219ENST00000556413 PDE2AO00408 941 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-219ENST00000556413 SSFA2P28290 1259 aa7.87□□□□□ -1.15
SCFD1-219ENST00000556413 CABP4P57796 275 aa7.87□□□□□ -1.15
SCFD1-219ENST00000556413 PIP4K2BP78356 416 aa7.87□□□□□ -1.15
SCFD1-219ENST00000556413 MYRFLQ96LU7 910 aa7.87□□□□□ -1.15
SCFD1-219ENST00000556413 OSGEPQ9NPF4 335 aa7.87□□□□□ -1.15
SCFD1-219ENST00000556413 TMEM88BA6NKF7 163 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 MED26O95402 600 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 TGFB1P01137 390 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 MTMR3Q13615 1198 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 TTC16Q8NEE8 873 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 C7orf69Q9H7B7 122 aa7.86□□□□□ -1.15
SCFD1-219ENST00000556413 HMX2A2RU54 273 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 NLRP12P59046 1061 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 NFIAQ12857 509 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 ZDHHC13Q8IUH4 622 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 TRIM42Q8IWZ5 723 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 SOX13Q9UN79 622 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 POLIQ9UNA4 740 aa7.85□□□□□ -1.15
SCFD1-219ENST00000556413 HGSNATQ68CP4 663 aa7.84□□□□□ -1.15
SCFD1-219ENST00000556413 RNF43Q68DV7 783 aa7.84□□□□□ -1.15
SCFD1-219ENST00000556413 TMEM102Q8N9M5 508 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-219ENST00000556413 SLC7A3Q8WY07 619 aa7.84□□□□□ -1.15
SCFD1-219ENST00000556413 EREGO14944 169 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 NPR3P17342 541 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 ANKRD34AQ69YU3 496 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 ALKBH2Q6NS38 261 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 FAM20CQ8IXL6 584 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 CCDC82Q8N4S0 544 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 NXPE3Q969Y0 559 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 OSMRQ99650 979 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 RNF208Q9H0X6 261 aa7.83□□□□□ -1.16
SCFD1-219ENST00000556413 KIAA1324LA8MWY0 1029 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-219ENST00000556413 SART1O43290 800 aaKnown RBP7.82□□□□□ -1.16
SCFD1-219ENST00000556413 COBLO75128 1261 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 TNFRSF21O75509 655 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 PREPP48147 710 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-219ENST00000556413 CLEC10AQ8IUN9 316 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 FAM83CQ9BQN1 747 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 ZKSCAN3Q9BRR0 538 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 RUSC1Q9BVN2 902 aa7.82□□□□□ -1.16
SCFD1-219ENST00000556413 SOX1O00570 391 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-219ENST00000556413 PHACTR2O75167 634 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 BMP3P12645 472 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 ARL4DP49703 201 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 C19orf57Q0VDD7 668 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 BSNDQ8WZ55 320 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 DBNDD2Q9BQY9 259 aa7.81□□□□□ -1.16
SCFD1-219ENST00000556413 PRR19A6NJB7 356 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms