RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SPA17Q15506 151 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 RNF41Q9H4P4 317 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 ZDHHC9Q9Y397 364 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 MYL5Q02045 173 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 IP6K1Q92551 441 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 CENPHQ9H3R5 247 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 NDUFB9Q9Y6M9 179 aa17.25■□□□□ 0.35
ARHGEF40-207ENST00000556399 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 IGHMBP2P38935 993 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 EIF4A1P60842 406 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 GOLGA1Q92805 767 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 N4BP3O15049 544 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 MFSD6Q6ZSS7 791 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 ATP7BP35670 1465 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 RANBP6O60518 1105 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 GPTP24298 496 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 A0A0D9SFI3 127 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 CCDC175P0C221 793 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 AFMP43652 599 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
ARHGEF40-207ENST00000556399 KARSQ15046 597 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 NAA16Q6N069 864 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 KIAA1524Q8TCG1 905 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 TRMT112Q9UI30 125 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 OTUD7BQ6GQQ9 843 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 IMPACTQ9P2X3 320 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
ARHGEF40-207ENST00000556399 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 SLC5A1P13866 664 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 EVCP57679 992 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 ELP1O95163 1332 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 CTAGE15A4D2H0 777 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 CTAGE8P0CG41 777 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 FANCCQ00597 558 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 CTAGE6Q86UF2 777 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 CTAGE4Q8IX94 777 aa17.22■□□□□ 0.35
ARHGEF40-207ENST00000556399 CDC42BPBQ9Y5S2 1711 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 SLC9C2Q5TAH2 1124 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 EAF2Q96CJ1 260 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 RXRAP19793 462 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 TIMM10P62072 90 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 ATP2B3Q16720 1220 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 CTAGE1Q96RT6 745 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 LZTFL1Q9NQ48 299 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 NLRP5P59047 1200 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 FKBP15Q5T1M5 1219 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 BAG1Q99933 345 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 MYO6Q9UM54 1294 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
ARHGEF40-207ENST00000556399 WTAPQ15007 396 aa17.21■□□□□ 0.34
ARHGEF40-207ENST00000556399 ANO1Q5XXA6 986 aa17.21■□□□□ 0.34
ARHGEF40-207ENST00000556399 USP8P40818 1118 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 CEP112Q8N8E3 955 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 CYP2E1P05181 493 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 CTR9Q6PD62 1173 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZNF215Q9UL58 517 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 LARGE1O95461 756 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 RTN1Q16799 776 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 PUF60Q9UHX1 559 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-207ENST00000556399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.2■□□□□ 0.342e-7■■□□□ 11.9
ARHGEF40-207ENST00000556399 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 E9PCH4 1651 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 KBTBD3Q8NAB2 608 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZNF202O95125 648 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 TMEM87AQ8NBN3 555 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 CARD6Q9BX69 1037 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 CTAGE9A4FU28 777 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 KCNQ3O43525 872 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 DMTNQ08495 405 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 ZBTB9Q96C00 473 aa17.19■□□□□ 0.34
ARHGEF40-207ENST00000556399 SSBP05455 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 RRAGBQ5VZM2 374 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 DHX58Q96C10 678 aa17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 XPO4Q9C0E2 1151 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-207ENST00000556399 USO1O60763 962 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1428.3 ms