RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 DLL1O00548 723 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 PTCD1O75127 700 aaKnown RBP6.36□□□□□ -1.39
ATXN3-240ENST00000556339 ALX3O95076 343 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 BRD2P25440 801 aaKnown RBP6.36□□□□□ -1.39
ATXN3-240ENST00000556339 COX20Q5RI15 118 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 CFAP70Q5T0N1 1121 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
ATXN3-240ENST00000556339 PCMTD2Q9NV79 361 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 RNF112Q9ULX5 631 aa6.36□□□□□ -1.39
ATXN3-240ENST00000556339 FAM177BA6PVY3 158 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 SOX18P35713 384 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 SWI5Q1ZZU3 235 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 C16orf46Q6P387 395 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 ILDR2Q71H61 639 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 NLRP13Q86W25 1043 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 MAP4K3Q8IVH8 894 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 MKNK1Q9BUB5 465 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 MUC3BQ9H195 1237 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 KCNMB2Q9Y691 235 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 UGGT2Q9NYU1 1516 aa6.35□□□□□ -1.39
ATXN3-240ENST00000556339 ACIN1Q9UKV3 1341 aaKnown RBP6.34□□□□□ -1.39
ATXN3-240ENST00000556339 UBAP1LF5GYI3 381 aa6.34□□□□□ -1.39
ATXN3-240ENST00000556339 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
ATXN3-240ENST00000556339 TRIM33Q9UPN9 1127 aa6.34□□□□□ -1.39
ATXN3-240ENST00000556339 TEX14Q8IWB6 1497 aa6.34□□□□□ -1.4
ATXN3-240ENST00000556339 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-240ENST00000556339 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-240ENST00000556339 FSTP19883 344 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 SCNN1AP37088 669 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 TTC39BQ5VTQ0 682 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-240ENST00000556339 ETFBKMTQ8IXQ9 262 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 AGGF1Q8N302 714 aaeCLIP6.33□□□□□ -1.4
ATXN3-240ENST00000556339 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 FNDC3AQ9Y2H6 1198 aaKnown RBP6.33□□□□□ -1.4
ATXN3-240ENST00000556339 PPME1Q9Y570 386 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 EPRSP07814 1512 aaKnown RBP6.33□□□□□ -1.4
ATXN3-240ENST00000556339 KDM5BQ9UGL1 1544 aa6.33□□□□□ -1.4
ATXN3-240ENST00000556339 KIAA0556O60303 1618 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 ZCCHC11Q5TAX3 1644 aaKnown RBP6.32□□□□□ -1.4
ATXN3-240ENST00000556339 GLI2P10070 1586 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 ARID4BQ4LE39 1312 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-240ENST00000556339 PLEKHD1A6NEE1 506 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 CDC25BP30305 580 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 HYAL2Q12891 473 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 SETDB1Q15047 1291 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 CEP135Q66GS9 1140 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 FAM117BQ6P1L5 589 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 DZIP1LQ8IYY4 767 aaKnown RBP6.32□□□□□ -1.4
ATXN3-240ENST00000556339 TMEM130Q8N3G9 435 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 CTTNBP2Q8WZ74 1663 aa6.32□□□□□ -1.4
ATXN3-240ENST00000556339 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
ATXN3-240ENST00000556339 LINC01387J3KSC0 135 aa6.31□□□□□ -1.4
ATXN3-240ENST00000556339 SSTR4P31391 388 aa6.31□□□□□ -1.4
ATXN3-240ENST00000556339 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-240ENST00000556339 TRIP4Q15650 581 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-240ENST00000556339 SLC51AQ86UW1 340 aa6.31□□□□□ -1.4
ATXN3-240ENST00000556339 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
ATXN3-240ENST00000556339 SAP130Q9H0E3 1048 aa6.31□□□□□ -1.4
ATXN3-240ENST00000556339 PRXQ9BXM0 1461 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 GSC2O15499 205 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 HOXD8P13378 290 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-240ENST00000556339 ZAP70P43403 619 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 ACAD11Q709F0 780 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 OR13H1Q8NG92 308 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 CEP41Q9BYV8 373 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 RAXQ9Y2V3 346 aa6.3□□□□□ -1.4
ATXN3-240ENST00000556339 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-240ENST00000556339 DHX15O43143 795 aaKnown RBP6.29□□□□□ -1.4
ATXN3-240ENST00000556339 CDC27P30260 824 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 ATP11AP98196 1134 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 NCAPG2Q86XI2 1143 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 GPR152Q8TDT2 470 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 STK32AQ8WU08 396 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 STOML1Q9UBI4 398 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 ZMIZ1Q9ULJ6 1067 aa6.29□□□□□ -1.4
ATXN3-240ENST00000556339 COL17A1Q9UMD9 1497 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-240ENST00000556339 RAPGEF3O95398 923 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 CD68P34810 354 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-240ENST00000556339 OCLNQ16625 522 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.28□□□□□ -1.4
ATXN3-240ENST00000556339 ABTB2Q8N961 1025 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 COL26A1Q96A83 441 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 CARD10Q9BWT7 1032 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 ABI2Q9NYB9 513 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-240ENST00000556339 CXXC1Q9P0U4 656 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-240ENST00000556339 PPRC1Q5VV67 1664 aaKnown RBP6.28□□□□□ -1.4
ATXN3-240ENST00000556339 ATP10BO94823 1461 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 ADGRL1O94910 1474 aa6.28□□□□□ -1.4
ATXN3-240ENST00000556339 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
ATXN3-240ENST00000556339 ELOAQ14241 798 aaKnown RBP6.27□□□□□ -1.41
ATXN3-240ENST00000556339 DUOXA2Q1HG44 320 aa6.27□□□□□ -1.41
ATXN3-240ENST00000556339 UTP4Q969X6 686 aaKnown RBP6.27□□□□□ -1.41
ATXN3-240ENST00000556339 RASSF4Q9H2L5 321 aa6.27□□□□□ -1.41
ATXN3-240ENST00000556339 STIM2Q9P246 746 aa6.27□□□□□ -1.41
ATXN3-240ENST00000556339 MAP3K4Q9Y6R4 1608 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms